CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001581.1-P	Field mustard	cytosol	99.54	99.54
CDX75804	Canola	cytosol	99.08	99.08
AT3G15060.1	Thale cress	cytosol	93.12	93.55
CDY20100	Canola	cytosol	90.37	90.37
HORVU5Hr1G056470.1	Barley	cytosol, plasma membrane	88.53	89.35
TraesCS5A01G184100.1	Wheat	golgi, plastid	88.53	89.35
KRH50137	Soybean	cytosol, mitochondrion	88.53	88.94
VIT_10s0003g00550.t01	Wine grape	cytosol	88.53	88.94
TraesCS5D01G188900.1	Wheat	cytosol	88.07	88.89
KRH20359	Soybean	cytosol, endoplasmic reticulum	88.07	88.48
TraesCS7B01G200600.1	Wheat	cytosol	87.61	88.43
TraesCS5B01G182200.1	Wheat	cytosol	87.61	88.43
OQU89311	Sorghum	cytosol	87.61	88.43
Os09t0327100-01	Rice	plasma membrane	87.61	88.43
TraesCS7D01G289000.1	Wheat	cytosol	87.16	87.96
TraesCS7A01G285200.1	Wheat	cytosol	87.16	87.96
EES19950	Sorghum	cytosol	86.7	87.5
KRH30863	Soybean	cytosol	86.7	87.1
TraesCS1A01G398400.1	Wheat	cytosol	85.78	86.57
KRH32712	Soybean	cytosol, endoplasmic reticulum, mitochondrion	85.78	86.18
Os05t0564400-02	Rice	plasma membrane	85.78	86.18
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	85.32	86.11
TraesCS1D01G405900.1	Wheat	cytosol	85.32	86.11
TraesCS1B01G426300.1	Wheat	cytosol	85.32	86.11
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	85.32	86.11
CDY34094	Canola	cytosol	83.94	83.94
CDY30818	Canola	cytosol	83.94	83.94
CDX90160	Canola	cytosol	82.11	83.26
CDX94631	Canola	cytosol	83.03	83.03
CDY35757	Canola	cytosol	83.03	83.03
GSMUA_Achr5P09130_001	Banana	cytosol	82.57	82.95
CDY15659	Canola	cytosol	82.57	82.57
GSMUA_Achr3P15540_001	Banana	cytosol	81.65	82.41
GSMUA_Achr8P27180_001	Banana	cytosol	80.73	81.48
CDX79548	Canola	cytosol	73.39	81.22
PGSC0003DMT400033395	Potato	cytosol	80.28	81.02
PGSC0003DMT400058784	Potato	cytosol	79.82	80.93
GSMUA_Achr1P11940_001	Banana	cytosol	79.82	80.56
Solyc03g006270.2.1	Tomato	cytosol	79.82	80.56
Solyc10g008840.2.1	Tomato	cytosol	79.36	80.47
GSMUA_Achr4P02760_001	Banana	cytosol	69.72	80.0
CDX76522	Canola	cytosol	78.44	78.8
CDY01540	Canola	cytosol	78.44	78.8
CDY55638	Canola	cytosol	78.44	78.8
CDX99430	Canola	cytosol	76.61	78.04
TraesCS3D01G244500.1	Wheat	cytosol	77.98	77.98
TraesCS3A01G247000.1	Wheat	cytosol	77.98	77.98
CDY62557	Canola	cytosol	76.15	77.21
CDY64916	Canola	cytosol	76.15	77.21
GSMUA_Achr7P14790_001	Banana	cytosol	66.97	76.04
GSMUA_Achr1P04780_001	Banana	cytosol	69.27	75.5
CDX96799	Canola	cytosol	74.31	75.0
CDY35128	Canola	cytosol	74.31	75.0
CDY40023	Canola	cytosol	73.85	74.54
Zm00001d043935_P001	Maize	cytosol	74.77	74.09
CDX87774	Canola	cytosol	72.94	73.61
OQU87300	Sorghum	cytosol	73.85	73.52
CDY60884	Canola	cytosol	71.56	69.96
CDY06210	Canola	cytosol	71.1	69.51
CDY09976	Canola	cytosol	71.1	69.51
CDY50888	Canola	cytosol	68.81	69.12
CDX93495	Canola	cytosol	68.35	68.66
CDY33014	Canola	cytosol	67.43	67.74
CDY06256	Canola	cytosol	66.06	67.29
CDY09919	Canola	cytosol	66.06	67.29
CDY06703	Canola	cytosol	66.06	66.67
CDY02867	Canola	cytosol	65.6	65.9
CDY32661	Canola	cytosol	65.6	65.9
CDY71720	Canola	cytosol	65.14	65.44
CDX81790	Canola	plastid	73.39	59.93
CDX73833	Canola	cytosol	59.63	58.82
CDY00758	Canola	cytosol	59.63	58.82
CDY50568	Canola	cytosol	59.17	58.11
CDY52622	Canola	cytosol	59.17	58.11
CDY08447	Canola	cytosol	58.72	57.66
CDY42133	Canola	cytosol	58.72	57.66
CDX96994	Canola	cytosol	58.72	57.4
CDX86332	Canola	cytosol	58.72	57.4
CDX80299	Canola	cytosol	67.89	57.36
GSMUA_Achr7P10970_001	Banana	cytosol	66.51	57.31
CDX69843	Canola	cytosol	58.26	56.95
CDY54519	Canola	cytosol	58.26	56.95
CDX86101	Canola	cytosol	66.51	56.64
CDY69836	Canola	cytosol	56.42	54.91
CDY18682	Canola	cytosol	56.42	54.67
CDX81274	Canola	cytosol	56.42	54.19
CDX99094	Canola	cytosol	66.51	50.52
TraesCS3B01G272300.1	Wheat	cytosol	77.98	49.13
CDX90017	Canola	cytosol	52.75	48.52
CDY15192	Canola	cytosol	52.75	48.52
CDX69367	Canola	cytosol	38.07	45.11
CDX69369	Canola	cytosol	56.42	30.15

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:A0A078CZ50	EnsemblPlants:CDX82451	ProteinID:CDX82451	ProteinID:CDX82451.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00137589001	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF649	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0004EECFBF	:

Description

BnaA03g33700D

Coordinates

chrLK031828:-:1342955..1343918

Molecular Weight (calculated)

24217.5 Da

IEP (calculated)

5.418

GRAVY (calculated)

-0.256

Length

218 amino acids

Sequence
(BLAST)

001: MAAYRADDDY DFLYKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIRVDEK VVKAQIWDTA GQERYRAITS AYYRGAVGAF LVYDVTRRVT
101: FENVERWLKE LRDHTDANIV CMLVGNKADL RHLRAVSTED ATAFAEREST FFMETSALEA LNVEDAFTQV LSQIYRVASK KALDVGGDDH AALPKGQSIN
201: VGGKDDVSEV KKVGCCSS

Best Arabidopsis Sequence Match ( AT3G15060.1 )
(BLAST)

001: MAAYRADDDY DFLYKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDEK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTEANIV IMLVGNKADL RHLRAVSTED AKAFAERENT FFMETSALEA LNVENAFTEV LSQIYRVASK KALDIGDDHT TLPKGQSINV
201: GSKDDVSEVK KVGCCSS

Arabidopsis Description

RABA1GRas-related protein RABA1g [Source:UniProtKB/Swiss-Prot;Acc:Q9LK99]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.