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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037810.1-P Field mustard cytosol 98.68 99.56
CDY18682 Canola cytosol 98.68 99.56
AT5G65270.1 Thale cress cytosol 93.83 94.25
CDX69843 Canola cytosol 85.9 87.44
CDX96994 Canola cytosol 85.46 87.0
CDY69836 Canola cytosol 81.5 82.59
KRH59301 Soybean cytosol, endoplasmic reticulum 81.94 81.22
Zm00001d014278_P001 Maize extracellular, plasma membrane 75.33 78.8
GSMUA_Achr3P01690_001 Banana cytosol 75.77 78.54
TraesCS1D01G136900.1 Wheat cytosol 74.45 78.24
TraesCS1B01G152100.1 Wheat cytosol 74.45 78.24
TraesCS1A01G131500.2 Wheat cytosol 74.45 78.24
Os10t0377400-01 Rice cytosol 74.45 78.24
GSMUA_Achr3P21290_001 Banana cytosol 75.33 78.08
OQU91938 Sorghum cytosol 74.45 77.88
EER92725 Sorghum cytosol 74.01 77.42
GSMUA_Achr8P18090_001 Banana cytosol 74.01 77.06
Zm00001d048222_P001 Maize extracellular, plasma membrane 73.57 76.96
Zm00001d028002_P001 Maize mitochondrion 73.13 76.5
KRH43151 Soybean cytosol, endoplasmic reticulum 77.53 74.26
CDY00758 Canola cytosol 66.96 68.78
CDX73833 Canola cytosol 66.96 68.78
CDX86332 Canola cytosol 66.96 68.16
CDY50568 Canola cytosol 66.52 68.02
CDY52622 Canola cytosol 66.52 68.02
CDX69367 Canola cytosol 55.07 67.93
CDY54519 Canola cytosol 66.52 67.71
CDY42133 Canola cytosol 65.2 66.67
CDY08447 Canola cytosol 65.2 66.67
HORVU1Hr1G034400.4 Barley plasma membrane 73.13 60.81
CDY06703 Canola cytosol 57.71 60.65
CDY06256 Canola cytosol 56.83 60.28
CDY09919 Canola cytosol 56.83 60.28
CDY71720 Canola cytosol 56.83 59.45
CDY33014 Canola cytosol 56.83 59.45
CDX99430 Canola cytosol 55.95 59.35
CDY64916 Canola cytosol 55.95 59.07
CDY62557 Canola cytosol 55.95 59.07
CDX96799 Canola cytosol 55.51 58.33
CDX90160 Canola cytosol 55.07 58.14
CDY32661 Canola cytosol 55.51 58.06
CDY02867 Canola cytosol 55.51 58.06
CDX87774 Canola cytosol 55.07 57.87
CDY50888 Canola cytosol 55.07 57.6
CDY35757 Canola cytosol 55.07 57.34
CDX93495 Canola cytosol 54.63 57.14
CDY34094 Canola cytosol 54.63 56.88
CDY30818 Canola cytosol 54.63 56.88
CDX94631 Canola cytosol 54.63 56.88
CDY15659 Canola cytosol 54.63 56.88
CDY35128 Canola cytosol 53.74 56.48
CDY20100 Canola cytosol 54.19 56.42
CDX82451 Canola cytosol 54.19 56.42
CDY40023 Canola cytosol 53.3 56.02
CDY06210 Canola cytosol 54.63 55.61
CDX75804 Canola cytosol 53.3 55.5
CDY09976 Canola cytosol 54.19 55.16
CDY55638 Canola cytosol 52.42 54.84
CDY01540 Canola cytosol 52.42 54.84
CDX76522 Canola cytosol 52.42 54.84
CDX79548 Canola cytosol 46.7 53.81
CDX90017 Canola cytosol 55.95 53.59
CDY15192 Canola cytosol 55.95 53.59
CDX80299 Canola cytosol 57.27 50.39
CDX86101 Canola cytosol 56.39 50.0
CDY60884 Canola cytosol 48.9 49.78
CDX81790 Canola plastid 54.63 46.44
CDX99094 Canola cytosol 56.39 44.6
CDX69369 Canola cytosol 79.3 44.12
Protein Annotations
MapMan:22.8.1.1Gene3D:3.40.50.300GO:A0A078CZ54EnsemblPlants:CDX81274ProteinID:CDX81274ProteinID:CDX81274.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00134785001InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449PFscan:PS51419
PANTHER:PTHR24073PANTHER:PTHR24073:SF647SMART:SM00173SMART:SM00174SMART:SM00175SMART:SM00176
SMART:SM00177SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231UniParc:UPI0004EE1C1A
SEG:seg:::::
Description
BnaC09g06850D
Coordinates
chrLK031824:+:631044..632731
Molecular Weight (calculated)
24824.4 Da
IEP (calculated)
5.727
GRAVY (calculated)
-0.241
Length
227 amino acids
Sequence
(BLAST)
001: MASGGGGGGG YGDPSQKIDY VFKVVLIGDS AVGKSQILAR YARDEFSLDS KATIGVEFQT RTLVIDHKSV KAQIWDTAGQ ERYRAVTSAY YRGAVGAMLV
101: YDITRRQTFD HIPRWLEELR AHADKNIVII LIGNKSDLED QRAIPTEDAK EFAEKEGLFF LETSAFNASN VESAFSTVLN EIFNIVNKKS LAVSEEEQHG
201: SLAGKKIDIV PGPGQVIPAK SNMCCNS
Best Arabidopsis Sequence Match ( AT5G65270.1 )
(BLAST)
001: MTSGGGYGDP SQKIDYVFKV VLIGDSAVGK SQILARYARD EFSLDSKATI GVEFQTRTLV IDHKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS
Arabidopsis Description
RABA4ARABA4a [Source:UniProtKB/TrEMBL;Acc:A0A178UKD0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.