Factsheet for Bra037810.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18682	Canola	cytosol	100.0	100.0
CDX81274	Canola	cytosol	99.56	98.68
AT5G65270.1	Thale cress	cytosol	95.11	94.69
Bra009040.1-P	Field mustard	cytosol	86.22	87.0
Bra011818.1-P	Field mustard	cytosol	82.67	83.41
KRH59301	Soybean	cytosol, endoplasmic reticulum	83.11	81.66
Zm00001d014278_P001	Maize	extracellular, plasma membrane	76.44	79.26
GSMUA_Achr3P01690_001	Banana	cytosol	76.89	79.0
TraesCS1D01G136900.1	Wheat	cytosol	75.56	78.7
TraesCS1B01G152100.1	Wheat	cytosol	75.56	78.7
TraesCS1A01G131500.2	Wheat	cytosol	75.56	78.7
Os10t0377400-01	Rice	cytosol	75.56	78.7
GSMUA_Achr3P21290_001	Banana	cytosol	76.44	78.54
OQU91938	Sorghum	cytosol	75.56	78.34
EER92725	Sorghum	cytosol	75.11	77.88
GSMUA_Achr8P18090_001	Banana	cytosol	75.11	77.52
Zm00001d048222_P001	Maize	extracellular, plasma membrane	74.67	77.42
Zm00001d028002_P001	Maize	mitochondrion	74.22	76.96
KRH43151	Soybean	cytosol, endoplasmic reticulum	78.67	74.68
Bra001439.1-P	Field mustard	cytosol	68.0	69.23
Bra038701.1-P	Field mustard	cytosol	67.56	68.47
Bra037516.1-P	Field mustard	cytosol	67.56	68.16
HORVU1Hr1G034400.4	Barley	plasma membrane	74.22	61.17
Bra002589.1-P	Field mustard	cytosol	57.78	59.91
Bra015578.1-P	Field mustard	cytosol	57.33	59.72
Bra018190.1-P	Field mustard	cytosol	57.33	59.45
Bra020334.1-P	Field mustard	cytosol	56.44	58.53
Bra010860.1-P	Field mustard	cytosol	55.56	58.14
Bra020006.1-P	Field mustard	cytosol	55.56	57.6
Bra026016.1-P	Field mustard	cytosol	55.11	57.41
Bra032914.1-P	Field mustard	cytosol	55.11	56.88
Bra030105.1-P	Field mustard	cytosol	55.11	56.88
Bra034771.1-P	Field mustard	cytosol	66.22	56.65
Bra021589.1-P	Field mustard	cytosol	54.67	56.42
Bra001581.1-P	Field mustard	cytosol	54.67	56.42
Bra032424.1-P	Field mustard	cytosol	55.56	56.05
Bra022959.1-P	Field mustard	cytosol	53.78	55.5
Bra021009.1-P	Field mustard	cytosol	52.89	54.84
Bra012597.1-P	Field mustard	cytosol	52.89	54.84
Bra033277.1-P	Field mustard	cytosol	56.44	53.59
Bra031573.1-P	Field mustard	cytosol	56.0	49.22

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra037810	EnsemblPlants:Bra037810.1	EnsemblPlants:Bra037810.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
GO:GO:0042546	UniProt:M4F9P7	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419
PANTHER:PTHR24073	PANTHER:PTHR24073:SF647	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002541B3D
SEG:seg	:	:	:	:	:

Description

AT5G65270 (E=3e-113) AtRABA4a | AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding

Coordinates

chrA09:+:3677991..3679429

Molecular Weight (calculated)

24724.3 Da

IEP (calculated)

5.727

GRAVY (calculated)

-0.240

Length

225 amino acids

Sequence
(BLAST)

001: MASGGGGGYG DPSQKIDYVF KVVLIGDSAV GKSQILARYA RDEFSLDSKA TIGVEFQTRT LVIDHKSVKA QIWDTAGQER YRAVTSAYYR GAVGAMLVYD
101: ITRRQTFDHI PRWLEELRAH ADKNIVIILI GNKSDLEDQR AIPTEDAKEF AEKEGLFFLE TSAFNATNVE SAFSTVLNEI FNIVNKKSLA VSEEEQHGSL
201: AGKKIDIVPG PGQVIPAKSN MCCNS

Best Arabidopsis Sequence Match ( AT5G65270.1 )
(BLAST)

001: MTSGGGYGDP SQKIDYVFKV VLIGDSAVGK SQILARYARD EFSLDSKATI GVEFQTRTLV IDHKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS

Arabidopsis Description

RABA4ARABA4a [Source:UniProtKB/TrEMBL;Acc:A0A178UKD0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.