Factsheet for Bra032424.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06210	Canola	cytosol	100.0	100.0
CDY09976	Canola	cytosol	99.55	99.55
AT1G06400.1	Thale cress	cytosol	90.58	93.52
KRH27074	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	81.17	83.03
KRH22259	Soybean	cytosol, nucleus	81.17	83.03
Solyc07g055290.2.1	Tomato	plastid	77.58	79.36
Bra026016.1-P	Field mustard	cytosol	73.54	75.93
Bra022959.1-P	Field mustard	cytosol	69.51	71.1
Bra001581.1-P	Field mustard	cytosol	69.06	70.64
Bra021589.1-P	Field mustard	cytosol	68.61	70.18
Bra010860.1-P	Field mustard	cytosol	67.26	69.77
Bra032914.1-P	Field mustard	cytosol	68.16	69.72
Bra030105.1-P	Field mustard	cytosol	68.16	69.72
Bra021009.1-P	Field mustard	cytosol	66.82	68.66
Bra012597.1-P	Field mustard	cytosol	66.37	68.2
Bra018190.1-P	Field mustard	cytosol	63.23	64.98
Bra002589.1-P	Field mustard	cytosol	63.23	64.98
Bra020006.1-P	Field mustard	cytosol	63.23	64.98
Bra020334.1-P	Field mustard	cytosol	62.33	64.06
Bra015578.1-P	Field mustard	cytosol	60.99	62.96
Bra001439.1-P	Field mustard	cytosol	57.4	57.92
Bra009040.1-P	Field mustard	cytosol	57.4	57.4
Bra038701.1-P	Field mustard	cytosol	56.95	57.21
Bra037516.1-P	Field mustard	cytosol	56.05	56.05
Bra011818.1-P	Field mustard	cytosol	55.61	55.61
Bra037810.1-P	Field mustard	cytosol	56.05	55.56
Bra031573.1-P	Field mustard	cytosol	59.64	51.95
Bra034771.1-P	Field mustard	cytosol	56.05	47.53
Bra033277.1-P	Field mustard	cytosol	47.98	45.15

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra032424	EnsemblPlants:Bra032424.1	EnsemblPlants:Bra032424.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0009719	GO:GO:0009733	GO:GO:0009987
GO:GO:0016020	GO:GO:0016787	GO:GO:0042546	UniProt:M4EUE2	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF544	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231
UniParc:UPI00025434C4	:	:	:	:	:

Description

AT1G06400 (E=1e-110) ARA2, ATRABA1A, ATRAB11E, ARA-2 | ARA-2; GTP binding

Coordinates

chrA09:+:36017208..36018047

Molecular Weight (calculated)

24731.4 Da

IEP (calculated)

8.053

GRAVY (calculated)

-0.344

Length

223 amino acids

Sequence
(BLAST)

001: MAGSYKVDEE YDYLFKLVLI GDSGVGKSNL LSRFTKNEFN LESKSTIGVE FATKTLRVDS KVVKAQIWDT AGQERYRAIT SAYYRGAVGA LLVYDVTRHS
101: TFENAARWLR ELRGHTDPNI VVMLIGNKCD LRHLVAIKTE EAKAFAERES LYFMETSALD ATNVENAFTE VLAQIHKIVS KRSVDGTNRE GEGGSSSGLP
201: KKGETINVKE DGSVLKRMGC CSN

Best Arabidopsis Sequence Match ( AT1G06400.1 )
(BLAST)

001: MAGYRADEEY DYLFKLVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATKTTKVEGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LIYDVTRHAT
101: FENAARWLRE LRGHTDPNIV VMLIGNKCDL RHLVAVKTEE AKAFAERESL YFMETSALDA TNVENAFTEV LTQIHKIVSK RSVDGGGESA DLPGKGETIN
201: VKEDGSVLKR MGCCSN

Arabidopsis Description

RABA1ARas-related protein RABA1a [Source:UniProtKB/Swiss-Prot;Acc:P28185]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.