Factsheet for Bra022959.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79548	Canola	cytosol	89.45	98.98
AT2G33870.1	Thale cress	cytosol	91.74	91.74
Bra032914.1-P	Field mustard	cytosol	90.83	90.83
Bra030105.1-P	Field mustard	cytosol	90.83	90.83
Bra010860.1-P	Field mustard	cytosol	88.99	90.23
KRH20359	Soybean	cytosol, endoplasmic reticulum	85.78	86.18
KRH32712	Soybean	cytosol, endoplasmic reticulum, mitochondrion	85.32	85.71
KRH50137	Soybean	cytosol, mitochondrion	85.32	85.71
KRH30863	Soybean	cytosol	84.4	84.79
HORVU5Hr1G056470.1	Barley	cytosol, plasma membrane	83.94	84.72
TraesCS5A01G184100.1	Wheat	golgi, plastid	83.94	84.72
TraesCS5B01G182200.1	Wheat	cytosol	83.49	84.26
TraesCS5D01G188900.1	Wheat	cytosol	83.49	84.26
VIT_10s0003g00550.t01	Wine grape	cytosol	83.49	83.87
Os09t0327100-01	Rice	plasma membrane	83.03	83.8
TraesCS7B01G200600.1	Wheat	cytosol	83.03	83.8
OQU89311	Sorghum	cytosol	83.03	83.8
PGSC0003DMT400058784	Potato	cytosol	82.57	83.72
Solyc10g008840.2.1	Tomato	cytosol	82.57	83.72
TraesCS7D01G289000.1	Wheat	cytosol	82.57	83.33
TraesCS7A01G285200.1	Wheat	cytosol	82.57	83.33
EES19950	Sorghum	cytosol	82.57	83.33
TraesCS1A01G398400.1	Wheat	cytosol	82.57	83.33
TraesCS1D01G405900.1	Wheat	cytosol	82.11	82.87
TraesCS1B01G426300.1	Wheat	cytosol	82.11	82.87
PGSC0003DMT400033395	Potato	cytosol	82.11	82.87
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	81.65	82.41
Solyc03g006270.2.1	Tomato	cytosol	81.65	82.41
Os05t0564400-02	Rice	plasma membrane	81.19	81.57
GSMUA_Achr3P15540_001	Banana	cytosol	80.73	81.48
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	80.28	81.02
Bra001581.1-P	Field mustard	cytosol	80.73	80.73
GSMUA_Achr1P11940_001	Banana	cytosol	79.36	80.09
Bra021589.1-P	Field mustard	cytosol	79.36	79.36
GSMUA_Achr8P27180_001	Banana	cytosol	78.44	79.17
GSMUA_Achr4P02760_001	Banana	cytosol	68.81	78.95
GSMUA_Achr5P09130_001	Banana	cytosol	78.44	78.8
Bra012597.1-P	Field mustard	cytosol	78.44	78.8
Bra021009.1-P	Field mustard	cytosol	77.52	77.88
GSMUA_Achr1P04780_001	Banana	cytosol	70.18	76.5
GSMUA_Achr7P14790_001	Banana	cytosol	65.6	74.48
TraesCS3A01G247000.1	Wheat	cytosol	73.85	73.85
TraesCS3D01G244500.1	Wheat	cytosol	73.85	73.85
Bra026016.1-P	Field mustard	cytosol	72.48	73.15
OQU87300	Sorghum	cytosol	71.1	70.78
Zm00001d043935_P001	Maize	cytosol	70.64	70.0
Bra032424.1-P	Field mustard	cytosol	71.1	69.51
Bra002589.1-P	Field mustard	cytosol	64.68	64.98
Bra020334.1-P	Field mustard	cytosol	63.3	63.59
Bra020006.1-P	Field mustard	cytosol	63.3	63.59
Bra018190.1-P	Field mustard	cytosol	62.84	63.13
Bra015578.1-P	Field mustard	cytosol	61.47	62.04
Bra001439.1-P	Field mustard	cytosol	57.8	57.01
Bra037516.1-P	Field mustard	cytosol	58.26	56.95
Bra038701.1-P	Field mustard	cytosol	57.34	56.31
Bra009040.1-P	Field mustard	cytosol	57.34	56.05
Bra011818.1-P	Field mustard	cytosol	55.5	54.26
Bra037810.1-P	Field mustard	cytosol	55.5	53.78
GSMUA_Achr7P10970_001	Banana	cytosol	61.93	53.36
Bra031573.1-P	Field mustard	cytosol	60.09	51.17
Bra033277.1-P	Field mustard	cytosol	52.29	48.1
Bra034771.1-P	Field mustard	cytosol	56.88	47.15
TraesCS3B01G272300.1	Wheat	cytosol	73.85	46.53

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra022959	EnsemblPlants:Bra022959.1	EnsemblPlants:Bra022959.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4E2F8	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF649	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000253FD42	:	:

Description

AT2G33870 (E=1e-112) ArRABA1h | ArRABA1h (Arabidopsis Rab GTPase homolog A1h); GTP binding

Coordinates

chrA03:-:7946733..7948110

Molecular Weight (calculated)

24214.5 Da

IEP (calculated)

6.138

GRAVY (calculated)

-0.281

Length

218 amino acids

Sequence
(BLAST)

001: MGAYKSEDDY DYLFKVVLTG DSGVGKSNLL SRFTKNDFSH DSRSTIGVEF ATRSIQVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRNHTDANIV IMLVGNKSDL RHLRAIPTEE VKAFAERENT FFMETSALEA LNVESAFTEV LTQIYRVVSK NALEGGADPT TALPKGQVIN
201: VGSRDDVSAV KKAGCCST

Best Arabidopsis Sequence Match ( AT2G33870.1 )
(BLAST)

001: MGTYKAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSH DSRSTIGVEF ATRSIQVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANTV IMLVGNKADL NHLRAISTEE VKDFAERENT FFMETSALEA INVENAFTEV LTQIYRVVSK KALDAGDDPT TALPKGQMIN
201: VGSRDDVSAV KKSGCCAT

Arabidopsis Description

RABA1HArRABA1h [Source:UniProtKB/TrEMBL;Acc:A0A178W1D1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.