Factsheet for Bra033277.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000056.1-P
Bra005112.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01200.1	Bra000056.1-P	AT2G38360.1	21798944
AT1G01200.1	Bra005112.1-P	AT2G38360.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90017	Canola	cytosol	100.0	100.0
CDY15192	Canola	cytosol	98.73	98.73
AT1G01200.1	Thale cress	cytosol	89.45	89.45
KRH68938	Soybean	cytosol	68.78	69.07
VIT_15s0048g03000.t01	Wine grape	cytosol	69.2	68.62
KRG97215	Soybean	cytosol	67.93	68.22
Solyc01g096220.2.1	Tomato	plastid	69.62	67.9
KRH47850	Soybean	cytosol	70.04	67.76
KRH06418	Soybean	cytosol	69.62	67.62
PGSC0003DMT400000356	Potato	cytosol	67.51	66.39
GSMUA_Achr9P00860_001	Banana	cytosol	63.71	65.65
GSMUA_Achr3P13850_001	Banana	cytosol	61.18	61.97
TraesCS7B01G287900.1	Wheat	cytosol	58.23	61.61
Os09t0527600-01	Rice	cytosol, plasma membrane	61.6	61.09
Os06t0714600-01	Rice	cytosol	57.38	60.44
TraesCS7D01G381500.1	Wheat	cytosol	56.96	60.27
HORVU5Hr1G080990.3	Barley	cytosol, plasma membrane, vacuole	56.12	60.18
Bra037516.1-P	Field mustard	cytosol	56.54	60.09
Bra011818.1-P	Field mustard	cytosol	56.12	59.64
Bra001439.1-P	Field mustard	cytosol	54.85	58.82
Bra038701.1-P	Field mustard	cytosol	54.85	58.56
TraesCS5D01G321800.1	Wheat	cytosol	59.49	57.55
EER90389	Sorghum	cytosol	50.63	57.42
Bra009040.1-P	Field mustard	cytosol	54.01	57.4
TraesCS5B01G316300.1	Wheat	cytosol	59.92	57.26
TraesCS5A01G315700.1	Wheat	cytosol	59.49	57.09
EER97073	Sorghum	cytosol	61.18	56.64
HORVU7Hr1G091490.3	Barley	cytosol	54.43	56.58
Bra037810.1-P	Field mustard	cytosol	53.59	56.44
Zm00001d021246_P002	Maize	cytosol	58.23	55.65
Bra020006.1-P	Field mustard	cytosol	50.21	54.84
Bra010860.1-P	Field mustard	cytosol	49.37	54.42
Bra021589.1-P	Field mustard	cytosol	49.37	53.67
Bra030105.1-P	Field mustard	cytosol	48.95	53.21
Bra032914.1-P	Field mustard	cytosol	48.95	53.21
Bra001581.1-P	Field mustard	cytosol	48.52	52.75
Bra020334.1-P	Field mustard	cytosol	48.1	52.53
Bra022959.1-P	Field mustard	cytosol	48.1	52.29
Bra012597.1-P	Field mustard	cytosol	47.68	52.07
Bra002589.1-P	Field mustard	cytosol	47.68	52.07
Bra018190.1-P	Field mustard	cytosol	47.26	51.61
Bra021009.1-P	Field mustard	cytosol	46.84	51.15
Bra015578.1-P	Field mustard	cytosol	46.41	50.93
Bra026016.1-P	Field mustard	cytosol	45.99	50.46
Bra034771.1-P	Field mustard	cytosol	54.43	49.05
Bra032424.1-P	Field mustard	cytosol	45.15	47.98
Bra031573.1-P	Field mustard	cytosol	46.41	42.97

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra033277	EnsemblPlants:Bra033277.1	EnsemblPlants:Bra033277.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005768	GO:GO:0008150
GO:GO:0009504	GO:GO:0009987	GO:GO:0016787	GO:GO:0042546	UniProt:M4EWU2	InterPro:P-loop_NTPase
PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF345	SMART:SM00173
SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI000254514B	:	:	:	:

Description

AT1G01200 (E=9e-116) ATRABA3, ATRAB-A3 | ATRABA3 (ARABIDOPSIS RAB GTPASE HOMOLOG A3); GTP binding

Coordinates

chrA10:-:4543121..4544098

Molecular Weight (calculated)

26207.9 Da

IEP (calculated)

4.916

GRAVY (calculated)

-0.222

Length

237 amino acids

Sequence
(BLAST)

001: MNEEMSGETP ENKHVSRPTL PEKIDYVFKV VVIGDSAVGK TQLLSRFTQN EFCYDSKSTI GVEFQTRTIT LQGKLVKAQI WDTAGQERYR AVTSAYYRGA
101: LGAMVVYDIT KRVSFDHVAR WVEDLRAHAD DSAVIMLVGN KADLAADKRA VTTEDAVEFA ETHRLFFSEV SALSGGNVDE AFFRLLEEIF SRVVVARKAL
201: ECENGTTAKL DGSRIDVIIS GSDLETGKTN EQASCSC

Best Arabidopsis Sequence Match ( AT1G01200.1 )
(BLAST)

001: MNEEMSGESP ENNKHVKKPT MPEKIDYVFK VVVIGDSAVG KTQLLSRFTH NEFCYDSKST IGVEFQTRTI TLRGKLVKAQ IWDTAGQERY RAVTSAYYRG
101: ALGAMVVYDI TKRLSFDHVA RWVEELRAHA DDSAVIMLVG NKADLSVGKR AVPTEDAVEF AETQRLFFSE VSALSGGNVD EAFFRLLEEI FSRVVVSRKA
201: MESDGGATVK LDGSRIDVIS GSDLETSNIK EQASCSC

Arabidopsis Description

RABA3RABA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.