Factsheet for TraesCS5D01G321800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G297900.1
TraesCS1B01G307400.1
TraesCS1D01G293300.1
TraesCS3A01G348100.1
TraesCS3B01G380000.1
TraesCS3D01G341700.1
TraesCS4A01G180500.1
TraesCS4B01G137300.1
TraesCS4D01G132000.1
TraesCS5A01G151600.1
TraesCS5B01G150200.1
TraesCS5D01G156800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G01200.1	TraesCS1A01G297900.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS1B01G307400.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS1D01G293300.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS3A01G348100.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS3B01G380000.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS3D01G341700.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS4A01G180500.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS4B01G137300.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS4D01G132000.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS5A01G151600.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS5B01G150200.1	AT2G38360.1	21798944
AT1G01200.1	TraesCS5D01G156800.1	AT2G38360.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G315700.1	Wheat	cytosol	97.14	96.36
HORVU5Hr1G080990.3	Barley	cytosol, plasma membrane, vacuole	86.53	95.93
TraesCS5B01G316300.1	Wheat	cytosol	96.33	95.16
Os09t0527600-01	Rice	cytosol, plasma membrane	84.08	86.19
Zm00001d021246_P002	Maize	cytosol	84.08	83.06
EER97073	Sorghum	cytosol	85.31	81.64
TraesCS7D01G381500.1	Wheat	cytosol	61.63	67.41
GSMUA_Achr3P13850_001	Banana	cytosol	63.67	66.67
GSMUA_Achr9P00860_001	Banana	cytosol	62.45	66.52
KRH06418	Soybean	cytosol	62.45	62.7
KRH47850	Soybean	cytosol	62.45	62.45
AT1G01200.1	Thale cress	cytosol	59.59	61.6
PGSC0003DMT400000356	Potato	cytosol	59.18	60.17
VIT_15s0048g03000.t01	Wine grape	cytosol	58.37	59.83
Solyc01g096220.2.1	Tomato	plastid	59.18	59.67
Bra033277.1-P	Field mustard	cytosol	57.55	59.49
CDX90017	Canola	cytosol	57.55	59.49
CDY15192	Canola	cytosol	57.14	59.07
KRH68938	Soybean	cytosol	56.73	58.9
KRG97215	Soybean	cytosol	56.33	58.47
TraesCS1D01G136900.1	Wheat	cytosol	50.61	57.41
TraesCS5D01G188900.1	Wheat	cytosol	48.57	55.09
TraesCS1D01G405900.1	Wheat	cytosol	48.16	54.63
TraesCS5D01G179100.1	Wheat	cytosol	50.2	54.42
TraesCS7D01G368300.1	Wheat	cytosol	48.16	54.38
TraesCS3D01G244500.1	Wheat	cytosol	48.16	54.13
TraesCS3D01G357500.1	Wheat	cytosol	47.76	53.92
TraesCS7D01G289000.1	Wheat	cytosol	47.35	53.7
TraesCS5D01G529500.1	Wheat	cytosol	48.16	52.44
TraesCS3D01G289400.1	Wheat	cytosol	46.12	51.13
TraesCS1D01G013300.1	Wheat	cytosol	46.53	51.12
TraesCS5D01G498600.1	Wheat	cytosol	44.08	50.23
TraesCS1D01G133200.1	Wheat	cytosol, plastid	43.27	48.85

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449
PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF679	SMART:SM00173	SMART:SM00174	SMART:SM00175
SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS5D01G321800
EnsemblPlants:TraesCS5D01G321800.1	TIGR:cd01868	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5D:+:413698299..413701127

Molecular Weight (calculated)

27091.8 Da

IEP (calculated)

5.470

GRAVY (calculated)

-0.390

Length

245 amino acids

Sequence
(BLAST)

001: MVSRGREEEE AAAGWEGEKE GEIDYVFKVV VVGDSAVGKT QLLGRFAKDE FFLDSKSTIG VEFQTRTLTL HRKQVKAQIW DTAGQERYRA VTSAYYRGAL
101: GAMVVYDVTR RATFDHVPRW VEELRAHADG STVVALVGNK ADAPAHRREV PADEAARFAE EQGLFFSEAS ALTGDNVERA FLALLEEVFA VVSRRALELD
201: EARRTRNGRD GGEALSLRGT RVDLHDPIME TSAMKKTASS QCSCS

Best Arabidopsis Sequence Match ( AT1G01200.1 )
(BLAST)

001: MNEEMSGESP ENNKHVKKPT MPEKIDYVFK VVVIGDSAVG KTQLLSRFTH NEFCYDSKST IGVEFQTRTI TLRGKLVKAQ IWDTAGQERY RAVTSAYYRG
101: ALGAMVVYDI TKRLSFDHVA RWVEELRAHA DDSAVIMLVG NKADLSVGKR AVPTEDAVEF AETQRLFFSE VSALSGGNVD EAFFRLLEEI FSRVVVSRKA
201: MESDGGATVK LDGSRIDVIS GSDLETSNIK EQASCSC

Arabidopsis Description

RABA3RABA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.