Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG97215 | Soybean | cytosol | 96.61 | 96.61 |
| KRH47850 | Soybean | cytosol | 86.44 | 83.27 |
| KRH06418 | Soybean | cytosol | 85.59 | 82.79 |
| VIT_15s0048g03000.t01 | Wine grape | cytosol | 77.12 | 76.15 |
| Solyc01g096220.2.1 | Tomato | plastid | 76.27 | 74.07 |
| PGSC0003DMT400000356 | Potato | cytosol | 75.42 | 73.86 |
| Bra033277.1-P | Field mustard | cytosol | 69.07 | 68.78 |
| AT1G01200.1 | Thale cress | cytosol | 69.07 | 68.78 |
| CDY15192 | Canola | cytosol | 69.07 | 68.78 |
| CDX90017 | Canola | cytosol | 69.07 | 68.78 |
| GSMUA_Achr9P00860_001 | Banana | cytosol | 65.25 | 66.96 |
| GSMUA_Achr3P13850_001 | Banana | cytosol | 65.25 | 65.81 |
| KRG97554 | Soybean | cytosol, endoplasmic reticulum | 60.17 | 63.68 |
| Os06t0714600-01 | Rice | cytosol | 60.59 | 63.56 |
| TraesCS7B01G287900.1 | Wheat | cytosol | 59.75 | 62.95 |
| KRH31313 | Soybean | endoplasmic reticulum | 59.32 | 62.78 |
| TraesCS7D01G381500.1 | Wheat | cytosol | 58.9 | 62.05 |
| KRH75359 | Soybean | endoplasmic reticulum | 58.05 | 61.44 |
| KRH33003 | Soybean | cytosol | 58.05 | 60.89 |
| KRG88929 | Soybean | cytosol | 57.2 | 60.54 |
| KRH59301 | Soybean | cytosol, endoplasmic reticulum | 58.47 | 60.26 |
| Os09t0527600-01 | Rice | cytosol, plasma membrane | 61.02 | 60.25 |
| HORVU5Hr1G080990.3 | Barley | cytosol, plasma membrane, vacuole | 55.93 | 59.73 |
| KRH71891 | Soybean | cytosol | 55.51 | 58.74 |
| KRH26288 | Soybean | endoplasmic reticulum | 53.81 | 58.53 |
| EER90389 | Sorghum | cytosol | 51.69 | 58.37 |
| KRH06049 | Soybean | endoplasmic reticulum | 53.39 | 58.33 |
| HORVU7Hr1G091490.3 | Barley | cytosol | 55.93 | 57.89 |
| KRH43151 | Soybean | cytosol, endoplasmic reticulum | 57.63 | 57.38 |
| KRH15036 | Soybean | cytosol, nucleus | 52.12 | 56.94 |
| TraesCS5D01G321800.1 | Wheat | cytosol | 58.9 | 56.73 |
| KRH29738 | Soybean | endoplasmic reticulum | 51.69 | 56.48 |
| KRH24729 | Soybean | endoplasmic reticulum, nucleus | 51.69 | 56.48 |
| TraesCS5B01G316300.1 | Wheat | cytosol | 59.32 | 56.45 |
| TraesCS5A01G315700.1 | Wheat | cytosol | 58.9 | 56.28 |
| KRH73103 | Soybean | cytosol, endoplasmic reticulum, nucleus | 51.69 | 56.22 |
| KRG97821 | Soybean | cytosol, endoplasmic reticulum, nucleus | 51.27 | 55.76 |
| KRH20359 | Soybean | cytosol, endoplasmic reticulum | 51.27 | 55.76 |
| Zm00001d021246_P002 | Maize | cytosol | 58.47 | 55.65 |
| KRH55839 | Soybean | endoplasmic reticulum | 50.85 | 55.3 |
| KRH25681 | Soybean | cytosol | 50.85 | 55.3 |
| KRH50137 | Soybean | cytosol, mitochondrion | 50.42 | 54.84 |
| KRH32712 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 50.42 | 54.84 |
| KRH27364 | Soybean | endoplasmic reticulum | 50.42 | 54.84 |
| EER97073 | Sorghum | cytosol | 59.32 | 54.69 |
| KRH22259 | Soybean | cytosol, nucleus | 50.42 | 54.59 |
| KRH30863 | Soybean | cytosol | 50.0 | 54.38 |
| KRH27074 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 50.0 | 54.13 |
| KRH21946 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 49.58 | 53.92 |
| KRH27503 | Soybean | cytosol | 51.27 | 53.07 |
| KRH36458 | Soybean | cytosol | 50.42 | 52.19 |
| KRH27001 | Soybean | cytosol, endoplasmic reticulum | 45.76 | 49.54 |
| KRH22324 | Soybean | cytosol, endoplasmic reticulum | 45.34 | 49.08 |
Protein Annotations
| EntrezGene:100787725 | MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EMBL:ACUP02002128 | EMBL:BT095950 | UniProt:C6TEC8 |
| EnsemblPlantsGene:GLYMA_03G259200 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 |
| GO:GO:0005794 | GO:GO:0016787 | EnsemblPlants:KRH68938 | ProteinID:KRH68938 | ProteinID:KRH68938.1 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF345 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0001B16B48 | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:45344795..45347051
Molecular Weight (calculated)
26125.0 Da
IEP (calculated)
5.702
GRAVY (calculated)
-0.176
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQEMNGVEA ERVKVNVHDK IDYVFKVVVI GDSAVGKTQI LSRFAKNEFC FDSKSTIGVE FQTRTVTING KVIKAQIWDT AGQERYRAVT SAYYRGALGA
101: MLVYDISKRQ SFDHVARWVD ELRAHADSSI VIMLIGNKGD LVDQRVVHAE DAVEFAEDQG LFFSETSALS GENVESAFFK LLEEIHRVIS KRSLECGNGK
201: ANADNNLATL KGSKIDVISG AELEITDMKK LSSCSC
101: MLVYDISKRQ SFDHVARWVD ELRAHADSSI VIMLIGNKGD LVDQRVVHAE DAVEFAEDQG LFFSETSALS GENVESAFFK LLEEIHRVIS KRSLECGNGK
201: ANADNNLATL KGSKIDVISG AELEITDMKK LSSCSC
001: MNEEMSGESP ENNKHVKKPT MPEKIDYVFK VVVIGDSAVG KTQLLSRFTH NEFCYDSKST IGVEFQTRTI TLRGKLVKAQ IWDTAGQERY RAVTSAYYRG
101: ALGAMVVYDI TKRLSFDHVA RWVEELRAHA DDSAVIMLVG NKADLSVGKR AVPTEDAVEF AETQRLFFSE VSALSGGNVD EAFFRLLEEI FSRVVVSRKA
201: MESDGGATVK LDGSRIDVIS GSDLETSNIK EQASCSC
101: ALGAMVVYDI TKRLSFDHVA RWVEELRAHA DDSAVIMLVG NKADLSVGKR AVPTEDAVEF AETQRLFFSE VSALSGGNVD EAFFRLLEEI FSRVVVSRKA
201: MESDGGATVK LDGSRIDVIS GSDLETSNIK EQASCSC
Arabidopsis Description
RABA3RABA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.