Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH06418 | Soybean | cytosol | 79.08 | 77.46 |
KRH68938 | Soybean | cytosol | 76.15 | 77.12 |
KRH47850 | Soybean | cytosol | 78.66 | 76.73 |
KRG97215 | Soybean | cytosol | 75.73 | 76.69 |
PGSC0003DMT400000356 | Potato | cytosol | 74.06 | 73.44 |
Solyc01g096220.2.1 | Tomato | plastid | 73.64 | 72.43 |
AT1G01200.1 | Thale cress | cytosol | 70.71 | 71.31 |
Bra033277.1-P | Field mustard | cytosol | 68.62 | 69.2 |
CDY15192 | Canola | cytosol | 68.62 | 69.2 |
CDX90017 | Canola | cytosol | 68.62 | 69.2 |
GSMUA_Achr9P00860_001 | Banana | cytosol | 66.11 | 68.7 |
GSMUA_Achr3P13850_001 | Banana | cytosol | 64.44 | 65.81 |
TraesCS7B01G287900.1 | Wheat | cytosol | 59.83 | 63.84 |
VIT_13s0064g01300.t01 | Wine grape | cytosol | 60.25 | 63.72 |
TraesCS7D01G381500.1 | Wheat | cytosol | 59.0 | 62.95 |
Os06t0714600-01 | Rice | cytosol | 58.58 | 62.22 |
VIT_07s0191g00030.t01 | Wine grape | cytosol | 58.58 | 61.95 |
VIT_08s0007g07800.t01 | Wine grape | cytosol | 57.32 | 61.44 |
HORVU5Hr1G080990.3 | Barley | cytosol, plasma membrane, vacuole | 56.49 | 61.09 |
Os09t0527600-01 | Rice | cytosol, plasma membrane | 60.25 | 60.25 |
VIT_10s0003g00550.t01 | Wine grape | cytosol | 53.97 | 59.45 |
EER90389 | Sorghum | cytosol | 51.88 | 59.33 |
VIT_12s0028g02650.t01 | Wine grape | cytosol | 53.56 | 59.26 |
HORVU7Hr1G091490.3 | Barley | cytosol | 56.49 | 59.21 |
VIT_12s0035g01140.t01 | Wine grape | extracellular | 52.72 | 58.6 |
VIT_06s0004g05550.t01 | Wine grape | cytosol, extracellular | 53.14 | 58.53 |
TraesCS5D01G321800.1 | Wheat | cytosol | 59.83 | 58.37 |
TraesCS5B01G316300.1 | Wheat | cytosol | 60.25 | 58.06 |
VIT_19s0014g01820.t01 | Wine grape | cytosol | 52.72 | 58.06 |
TraesCS5A01G315700.1 | Wheat | cytosol | 59.0 | 57.09 |
Zm00001d021246_P002 | Maize | cytosol | 58.58 | 56.45 |
EER97073 | Sorghum | cytosol | 59.83 | 55.86 |
VIT_13s0019g02470.t01 | Wine grape | cytosol | 51.88 | 51.45 |
VIT_19s0014g01160.t01 | Wine grape | extracellular | 51.88 | 49.21 |
Protein Annotations
EntrezGene:100260897 | wikigene:100260897 | MapMan:22.8.1.1 | Gene3D:3.40.50.300 | ProteinID:CBI38679 | ProteinID:CBI38679.3 |
UniProt:D7U7Z7 | EMBL:FN596739 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0005768 | GO:GO:0005794 | GO:GO:0016787 | EntrezGene:LOC100260897 | wikigene:LOC100260897 | InterPro:P-loop_NTPase |
PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF345 | SMART:SM00173 |
SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
TIGRFAMs:TIGR00231 | UniParc:UPI00015CA6E6 | ArrayExpress:VIT_15s0048g03000 | EnsemblPlantsGene:VIT_15s0048g03000 | EnsemblPlants:VIT_15s0048g03000.t01 | RefSeq:XP_002262618 |
RefSeq:XP_002262618.2 | RefSeq:XP_002262618.3 | : | : | : | : |
Description
No Description!
Coordinates
chr15:-:17091720..17092989
Molecular Weight (calculated)
26357.0 Da
IEP (calculated)
5.031
GRAVY (calculated)
-0.303
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDEMNGAGS HGDQSHQNQE NGHEKIDYVF KVVVIGDSAV GKTQILSRFT KNEFCFDSKS TIGVEFQTRT VTIKSKVIKA QIWDTAGQER YRAVTSAYYR
101: GALGAMLVYD ITKRQTFDHV ARWVEELRAH ADTSIVIMLV GNKADLVDQR AVPSEDAVEF SEDQGLFFSE TSALNGDNVE TAFFRVLEEI YGVVSKKALE
201: CDGKSNGCDA SNLKGSKIDV ISASDLEISE VKKLSACTC
101: GALGAMLVYD ITKRQTFDHV ARWVEELRAH ADTSIVIMLV GNKADLVDQR AVPSEDAVEF SEDQGLFFSE TSALNGDNVE TAFFRVLEEI YGVVSKKALE
201: CDGKSNGCDA SNLKGSKIDV ISASDLEISE VKKLSACTC
001: MNEEMSGESP ENNKHVKKPT MPEKIDYVFK VVVIGDSAVG KTQLLSRFTH NEFCYDSKST IGVEFQTRTI TLRGKLVKAQ IWDTAGQERY RAVTSAYYRG
101: ALGAMVVYDI TKRLSFDHVA RWVEELRAHA DDSAVIMLVG NKADLSVGKR AVPTEDAVEF AETQRLFFSE VSALSGGNVD EAFFRLLEEI FSRVVVSRKA
201: MESDGGATVK LDGSRIDVIS GSDLETSNIK EQASCSC
101: ALGAMVVYDI TKRLSFDHVA RWVEELRAHA DDSAVIMLVG NKADLSVGKR AVPTEDAVEF AETQRLFFSE VSALSGGNVD EAFFRLLEEI FSRVVVSRKA
201: MESDGGATVK LDGSRIDVIS GSDLETSNIK EQASCSC
Arabidopsis Description
RABA3RABA3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3F7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.