Factsheet for Bra031573.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
vacuole 1
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06256	Canola	cytosol	82.03	98.13
CDY09919	Canola	cytosol	82.03	98.13
AT1G07410.1	Thale cress	cytosol	78.91	94.39
Bra015578.1-P	Field mustard	cytosol	78.52	93.06
Bra018190.1-P	Field mustard	cytosol	72.66	85.71
KRH24729	Soybean	endoplasmic reticulum, nucleus	70.7	83.8
KRH29738	Soybean	endoplasmic reticulum	70.7	83.8
Bra002589.1-P	Field mustard	cytosol	70.7	83.41
Solyc06g005810.2.1	Tomato	cytosol, unclear	70.31	83.33
PGSC0003DMT400053686	Potato	cytosol	70.31	83.33
VIT_06s0004g05550.t01	Wine grape	cytosol, extracellular	70.31	82.95
Bra020334.1-P	Field mustard	cytosol	70.31	82.95
PGSC0003DMT400078200	Potato	cytosol	69.14	82.33
Solyc06g076450.2.1	Tomato	plastid	69.14	82.33
Bra020006.1-P	Field mustard	cytosol	62.89	74.19
Bra026016.1-P	Field mustard	cytosol	55.08	65.28
Bra001581.1-P	Field mustard	cytosol	55.08	64.68
Bra021589.1-P	Field mustard	cytosol	54.69	64.22
Bra010860.1-P	Field mustard	cytosol	52.73	62.79
Bra030105.1-P	Field mustard	cytosol	52.34	61.47
Bra021009.1-P	Field mustard	cytosol	51.95	61.29
Bra032914.1-P	Field mustard	cytosol	51.95	61.01
Bra012597.1-P	Field mustard	cytosol	51.56	60.83
Bra022959.1-P	Field mustard	cytosol	51.17	60.09
Bra032424.1-P	Field mustard	cytosol	51.95	59.64
Bra001439.1-P	Field mustard	cytosol	50.39	58.37
Bra038701.1-P	Field mustard	cytosol	50.39	58.11
Bra037516.1-P	Field mustard	cytosol	50.0	57.4
Bra009040.1-P	Field mustard	cytosol	49.61	56.95
Bra037810.1-P	Field mustard	cytosol	49.22	56.0
Bra011818.1-P	Field mustard	cytosol	48.05	55.16
Bra034771.1-P	Field mustard	cytosol	50.0	48.67
Bra033277.1-P	Field mustard	cytosol	42.97	46.41

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra031573	EnsemblPlants:Bra031573.1	EnsemblPlants:Bra031573.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4ERZ5	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF495	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SMART:SM00177
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00025433E4	:

Description

AT1G07410 (E=3e-110) ATRABA2B, RAB-A2B, ATRAB-A2B | ATRABA2B (ARABIDOPSIS RAB GTPASE HOMOLOG A2B); GTP binding / GTPase/ protein binding

Coordinates

chrA09:-:35769219..35772752

Molecular Weight (calculated)

28797.3 Da

IEP (calculated)

8.852

GRAVY (calculated)

-0.363

Length

256 amino acids

Sequence
(BLAST)

001: MANRLDNEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLHEL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAS NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SESSVDNKKV MWLDLNLTML VSKSRRNYEL VSRIFGTDKG YRRLKSLKEN SDLKQT

Best Arabidopsis Sequence Match ( AT1G07410.1 )
(BLAST)

001: MANRIDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST

Arabidopsis Description

RABA2BRABA2b [Source:UniProtKB/TrEMBL;Acc:A0A178WHD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.