Factsheet for Bra012597.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55638	Canola	cytosol	99.54	99.54
CDY01540	Canola	cytosol	99.54	99.54
AT4G18430.1	Thale cress	cytosol	96.31	96.31
Bra021009.1-P	Field mustard	cytosol	93.09	93.09
Solyc03g006270.2.1	Tomato	cytosol	81.57	81.94
PGSC0003DMT400033395	Potato	cytosol	81.57	81.94
KRH50137	Soybean	cytosol, mitochondrion	81.11	81.11
KRH20359	Soybean	cytosol, endoplasmic reticulum	81.11	81.11
VIT_10s0003g00550.t01	Wine grape	cytosol	81.11	81.11
EES19950	Sorghum	cytosol	80.65	81.02
Solyc10g008840.2.1	Tomato	cytosol	80.18	80.93
GSMUA_Achr3P15540_001	Banana	cytosol	80.18	80.56
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	80.18	80.56
OQU89311	Sorghum	cytosol	79.26	79.63
HORVU5Hr1G056470.1	Barley	cytosol, plasma membrane	79.26	79.63
Os09t0327100-01	Rice	plasma membrane	79.26	79.63
TraesCS5A01G184100.1	Wheat	golgi, plastid	79.26	79.63
PGSC0003DMT400058784	Potato	cytosol	78.8	79.53
KRH30863	Soybean	cytosol	79.26	79.26
TraesCS7B01G200600.1	Wheat	cytosol	78.8	79.17
TraesCS5D01G188900.1	Wheat	cytosol	78.8	79.17
TraesCS5B01G182200.1	Wheat	cytosol	78.8	79.17
TraesCS1A01G398400.1	Wheat	cytosol	78.8	79.17
Os05t0564400-02	Rice	plasma membrane	78.8	78.8
GSMUA_Achr5P09130_001	Banana	cytosol	78.8	78.8
GSMUA_Achr1P11940_001	Banana	cytosol	78.34	78.7
TraesCS1D01G405900.1	Wheat	cytosol	78.34	78.7
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	78.34	78.7
TraesCS1B01G426300.1	Wheat	cytosol	78.34	78.7
TraesCS7A01G285200.1	Wheat	cytosol	78.34	78.7
TraesCS7D01G289000.1	Wheat	cytosol	78.34	78.7
Bra022959.1-P	Field mustard	cytosol	78.8	78.44
Bra001581.1-P	Field mustard	cytosol	78.8	78.44
KRH32712	Soybean	cytosol, endoplasmic reticulum, mitochondrion	78.34	78.34
GSMUA_Achr8P27180_001	Banana	cytosol	77.42	77.78
Bra010860.1-P	Field mustard	cytosol	76.96	77.67
Bra030105.1-P	Field mustard	cytosol	77.88	77.52
Bra032914.1-P	Field mustard	cytosol	77.88	77.52
Bra021589.1-P	Field mustard	cytosol	76.96	76.61
GSMUA_Achr4P02760_001	Banana	cytosol	66.36	75.79
GSMUA_Achr1P04780_001	Banana	cytosol	67.28	73.0
TraesCS3A01G247000.1	Wheat	cytosol	72.81	72.48
TraesCS3D01G244500.1	Wheat	cytosol	72.81	72.48
GSMUA_Achr7P14790_001	Banana	cytosol	62.21	70.31
OQU87300	Sorghum	cytosol	69.59	68.95
Zm00001d043935_P001	Maize	cytosol	69.59	68.64
Bra026016.1-P	Field mustard	cytosol	68.2	68.52
Bra032424.1-P	Field mustard	cytosol	68.2	66.37
Bra002589.1-P	Field mustard	cytosol	64.98	64.98
Bra018190.1-P	Field mustard	cytosol	63.13	63.13
Bra020334.1-P	Field mustard	cytosol	62.67	62.67
Bra020006.1-P	Field mustard	cytosol	62.67	62.67
Bra015578.1-P	Field mustard	cytosol	61.75	62.04
Bra001439.1-P	Field mustard	cytosol	58.99	57.92
Bra037516.1-P	Field mustard	cytosol	58.99	57.4
Bra038701.1-P	Field mustard	cytosol	58.53	57.21
Bra009040.1-P	Field mustard	cytosol	56.68	55.16
Bra037810.1-P	Field mustard	cytosol	54.84	52.89
Bra011818.1-P	Field mustard	cytosol	53.92	52.47
GSMUA_Achr7P10970_001	Banana	cytosol	60.37	51.78
Bra031573.1-P	Field mustard	cytosol	60.83	51.56
Bra034771.1-P	Field mustard	cytosol	58.06	47.91
Bra033277.1-P	Field mustard	cytosol	52.07	47.68
TraesCS3B01G272300.1	Wheat	cytosol	72.81	45.66

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra012597	EnsemblPlants:Bra012597.1	EnsemblPlants:Bra012597.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4D7Y7	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF872	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002540A86	:	:

Description

AT4G18430 (E=1e-117) AtRABA1e | AtRABA1e (Arabidopsis Rab GTPase homolog A1e); GTP binding

Coordinates

chrA03:-:23307920..23308882

Molecular Weight (calculated)

24222.6 Da

IEP (calculated)

6.363

GRAVY (calculated)

-0.324

Length

217 amino acids

Sequence
(BLAST)

001: MGAYKSDDDY DYLFKLVLIG DSGVGKSNLL SRFTRNEFSI ESKSTIGVEF ATRSVHVDEK TIKAQLWATA GQERYRAITS AYYRGAVGAL LVYDITRHVT
101: FENVERWLKE LRDHTDASVV IMLVGNKADL RHLRAVPTEE ARSFSERENM FFMETSALDA TNVEQAFTHV LTQIYRVMSR KALDGTGDPT SLPKGQTIDI
201: GNKDDVTAVK SSGCCSS

Best Arabidopsis Sequence Match ( AT4G18430.1 )
(BLAST)

001: MGAYRADDDY DYLFKLVLIG DSGVGKSNLL SRFTRNEFSI ESKSTIGVEF ATRSVHVDEK IIKAQLWDTA GQERYRAITS AYYRGAVGAL LVYDITRHIT
101: FENVERWLKE LRDHTDANVV IMLVGNKADL RHLRAVPTEE ARSFSERENM FFMETSALDA TNVEQAFTHV LTQIYRVMSR KALDGTGDPM SLPKGQTIDI
201: GNKDDVTAVK SSGCCSG

Arabidopsis Description

RABA1ERas-related protein RABA1e [Source:UniProtKB/Swiss-Prot;Acc:O49513]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.