Factsheet for Bra021009.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76522	Canola	cytosol	99.54	99.54
AT4G18430.1	Thale cress	cytosol	95.85	95.85
Bra012597.1-P	Field mustard	cytosol	93.09	93.09
Solyc03g006270.2.1	Tomato	cytosol	81.57	81.94
PGSC0003DMT400033395	Potato	cytosol	81.57	81.94
KRH20359	Soybean	cytosol, endoplasmic reticulum	81.11	81.11
VIT_10s0003g00550.t01	Wine grape	cytosol	81.11	81.11
KRH50137	Soybean	cytosol, mitochondrion	80.18	80.18
EES19950	Sorghum	cytosol	79.72	80.09
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	79.26	79.63
KRH30863	Soybean	cytosol	79.26	79.26
PGSC0003DMT400058784	Potato	cytosol	78.34	79.07
GSMUA_Achr3P15540_001	Banana	cytosol	78.34	78.7
Os09t0327100-01	Rice	plasma membrane	78.34	78.7
TraesCS7B01G200600.1	Wheat	cytosol	78.34	78.7
HORVU5Hr1G056470.1	Barley	cytosol, plasma membrane	78.34	78.7
OQU89311	Sorghum	cytosol	78.34	78.7
TraesCS5A01G184100.1	Wheat	golgi, plastid	78.34	78.7
TraesCS1A01G398400.1	Wheat	cytosol	78.34	78.7
Solyc10g008840.2.1	Tomato	cytosol	77.88	78.6
Bra001581.1-P	Field mustard	cytosol	78.8	78.44
KRH32712	Soybean	cytosol, endoplasmic reticulum, mitochondrion	78.34	78.34
GSMUA_Achr5P09130_001	Banana	cytosol	78.34	78.34
TraesCS1D01G405900.1	Wheat	cytosol	77.88	78.24
TraesCS5B01G182200.1	Wheat	cytosol	77.88	78.24
TraesCS1B01G426300.1	Wheat	cytosol	77.88	78.24
TraesCS5D01G188900.1	Wheat	cytosol	77.88	78.24
TraesCS7A01G285200.1	Wheat	cytosol	77.88	78.24
TraesCS7D01G289000.1	Wheat	cytosol	77.88	78.24
Os05t0564400-02	Rice	plasma membrane	77.88	77.88
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	77.42	77.78
Bra010860.1-P	Field mustard	cytosol	76.96	77.67
Bra030105.1-P	Field mustard	cytosol	77.88	77.52
Bra021589.1-P	Field mustard	cytosol	77.88	77.52
Bra022959.1-P	Field mustard	cytosol	77.88	77.52
Bra032914.1-P	Field mustard	cytosol	77.88	77.52
GSMUA_Achr8P27180_001	Banana	cytosol	76.5	76.85
GSMUA_Achr1P11940_001	Banana	cytosol	75.58	75.93
GSMUA_Achr4P02760_001	Banana	cytosol	65.44	74.74
TraesCS3A01G247000.1	Wheat	cytosol	74.19	73.85
TraesCS3D01G244500.1	Wheat	cytosol	74.19	73.85
GSMUA_Achr1P04780_001	Banana	cytosol	67.28	73.0
OQU87300	Sorghum	cytosol	71.89	71.23
GSMUA_Achr7P14790_001	Banana	cytosol	62.21	70.31
Zm00001d043935_P001	Maize	cytosol	70.97	70.0
Bra026016.1-P	Field mustard	cytosol	68.66	68.98
Bra032424.1-P	Field mustard	cytosol	68.66	66.82
Bra002589.1-P	Field mustard	cytosol	64.06	64.06
Bra018190.1-P	Field mustard	cytosol	62.67	62.67
Bra020334.1-P	Field mustard	cytosol	62.21	62.21
Bra015578.1-P	Field mustard	cytosol	61.75	62.04
Bra020006.1-P	Field mustard	cytosol	61.75	61.75
Bra001439.1-P	Field mustard	cytosol	59.91	58.82
Bra038701.1-P	Field mustard	cytosol	59.45	58.11
Bra037516.1-P	Field mustard	cytosol	58.06	56.5
Bra009040.1-P	Field mustard	cytosol	56.68	55.16
Bra011818.1-P	Field mustard	cytosol	54.38	52.91
Bra037810.1-P	Field mustard	cytosol	54.84	52.89
Bra031573.1-P	Field mustard	cytosol	61.29	51.95
GSMUA_Achr7P10970_001	Banana	cytosol	60.37	51.78
Bra034771.1-P	Field mustard	cytosol	58.99	48.67
Bra033277.1-P	Field mustard	cytosol	51.15	46.84
TraesCS3B01G272300.1	Wheat	cytosol	74.19	46.53

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra021009	EnsemblPlants:Bra021009.1	EnsemblPlants:Bra021009.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4DWW3	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF872	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000254728F	:	:

Description

AT4G18430 (E=2e-117) AtRABA1e | AtRABA1e (Arabidopsis Rab GTPase homolog A1e); GTP binding

Coordinates

chrA08:-:10522816..10523639

Molecular Weight (calculated)

24296.7 Da

IEP (calculated)

6.035

GRAVY (calculated)

-0.342

Length

217 amino acids

Sequence
(BLAST)

001: MGGYRADDDY DYLFKLVLIG DSGVGKTNLL SRFTRNEFSI ESKSTIGVEF ATKSVHVDEK IIKAQLWDTA GQERYRAITS AYYRGAVGAL LVYDITRHIT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAVPTEE ARSFSERENM FFMETSALDA TNVEQAFTHV STQIYRVMSR KALDGTGDPT YLPKGQSIDI
201: GSKDDVTAVK SSGCCSG

Best Arabidopsis Sequence Match ( AT4G18430.1 )
(BLAST)

001: MGAYRADDDY DYLFKLVLIG DSGVGKSNLL SRFTRNEFSI ESKSTIGVEF ATRSVHVDEK IIKAQLWDTA GQERYRAITS AYYRGAVGAL LVYDITRHIT
101: FENVERWLKE LRDHTDANVV IMLVGNKADL RHLRAVPTEE ARSFSERENM FFMETSALDA TNVEQAFTHV LTQIYRVMSR KALDGTGDPM SLPKGQTIDI
201: GNKDDVTAVK SSGCCSG

Arabidopsis Description

RABA1ERas-related protein RABA1e [Source:UniProtKB/Swiss-Prot;Acc:O49513]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.