Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87300 | Sorghum | cytosol | 95.91 | 96.35 |
| TraesCS3A01G247000.1 | Wheat | cytosol | 86.82 | 87.61 |
| TraesCS3D01G244500.1 | Wheat | cytosol | 86.82 | 87.61 |
| AT5G60860.1 | Thale cress | cytosol | 77.27 | 78.34 |
| Zm00001d009572_P001 | Maize | cytosol, mitochondrion, plasma membrane | 76.82 | 78.24 |
| Os05t0564400-02 | Rice | plasma membrane | 76.36 | 77.42 |
| VIT_10s0003g00550.t01 | Wine grape | cytosol | 76.36 | 77.42 |
| Zm00001d039016_P001 | Maize | cytosol, mitochondrion, plasma membrane | 75.91 | 77.31 |
| KRH20359 | Soybean | cytosol, endoplasmic reticulum | 75.91 | 76.96 |
| VIT_19s0014g01820.t01 | Wine grape | cytosol | 75.91 | 76.96 |
| KRH50137 | Soybean | cytosol, mitochondrion | 75.0 | 76.04 |
| KRH30863 | Soybean | cytosol | 75.0 | 76.04 |
| Solyc07g053480.2.1 | Tomato | cytosol, plastid | 74.55 | 75.58 |
| PGSC0003DMT400024319 | Potato | cytosol | 74.55 | 75.58 |
| KRH25681 | Soybean | cytosol | 74.09 | 75.12 |
| KRH32712 | Soybean | cytosol, endoplasmic reticulum, mitochondrion | 74.09 | 75.12 |
| Solyc12g014080.1.1 | Tomato | cytosol | 74.09 | 75.12 |
| PGSC0003DMT400039780 | Potato | cytosol, mitochondrion | 74.09 | 75.12 |
| AT3G15060.1 | Thale cress | cytosol | 74.09 | 75.12 |
| CDX82451 | Canola | cytosol | 74.09 | 74.77 |
| CDX75804 | Canola | cytosol | 74.09 | 74.77 |
| Bra001581.1-P | Field mustard | cytosol | 74.09 | 74.77 |
| Solyc12g010790.1.1 | Tomato | cytosol, nucleus, unclear | 73.64 | 74.65 |
| PGSC0003DMT400020208 | Potato | cytosol | 73.64 | 74.65 |
| KRH55839 | Soybean | endoplasmic reticulum | 73.64 | 74.65 |
| Solyc03g006270.2.1 | Tomato | cytosol | 73.18 | 74.54 |
| PGSC0003DMT400033395 | Potato | cytosol | 73.18 | 74.54 |
| PGSC0003DMT400058784 | Potato | cytosol | 72.27 | 73.95 |
| VIT_12s0028g02650.t01 | Wine grape | cytosol | 72.27 | 73.61 |
| Solyc10g008840.2.1 | Tomato | cytosol | 71.82 | 73.49 |
| CDX90160 | Canola | cytosol | 71.36 | 73.02 |
| Bra010860.1-P | Field mustard | cytosol | 71.36 | 73.02 |
| CDY30818 | Canola | cytosol | 72.27 | 72.94 |
| CDY34094 | Canola | cytosol | 72.27 | 72.94 |
| CDY20100 | Canola | cytosol | 72.27 | 72.94 |
| Bra032914.1-P | Field mustard | cytosol | 72.27 | 72.94 |
| Bra021589.1-P | Field mustard | cytosol | 72.27 | 72.94 |
| CDY35757 | Canola | cytosol | 71.82 | 72.48 |
| CDX94631 | Canola | cytosol | 71.82 | 72.48 |
| Bra030105.1-P | Field mustard | cytosol | 71.82 | 72.48 |
| Zm00001d046313_P001 | Maize | plastid | 71.36 | 72.35 |
| CDY15659 | Canola | cytosol | 71.36 | 72.02 |
| AT1G28550.1 | Thale cress | cytosol | 71.36 | 72.02 |
| AT2G33870.1 | Thale cress | cytosol | 70.91 | 71.56 |
| KRH27001 | Soybean | cytosol, endoplasmic reticulum | 70.91 | 71.56 |
| CDX76522 | Canola | cytosol | 70.45 | 71.43 |
| Bra021009.1-P | Field mustard | cytosol | 70.0 | 70.97 |
| AT4G18430.1 | Thale cress | cytosol | 70.0 | 70.97 |
| KRH22324 | Soybean | cytosol, endoplasmic reticulum | 70.0 | 70.64 |
| Bra022959.1-P | Field mustard | cytosol | 70.0 | 70.64 |
| CDX79548 | Canola | cytosol | 63.18 | 70.56 |
| CDY55638 | Canola | cytosol | 69.09 | 70.05 |
| CDY01540 | Canola | cytosol | 69.09 | 70.05 |
| Bra012597.1-P | Field mustard | cytosol | 68.64 | 69.59 |
| GSMUA_Achr7P14790_001 | Banana | cytosol | 60.45 | 69.27 |
| CDY60884 | Canola | cytosol | 65.91 | 65.02 |
| Zm00001d034675_P002 | Maize | cytosol | 61.82 | 63.26 |
| Zm00001d005495_P001 | Maize | extracellular, mitochondrion, plasma membrane | 63.64 | 62.78 |
| Zm00001d034803_P001 | Maize | cytosol | 63.64 | 59.83 |
| Zm00001d034802_P001 | Maize | cytosol | 63.64 | 59.83 |
| Zm00001d014278_P001 | Maize | extracellular, plasma membrane | 55.91 | 56.68 |
| Zm00001d048222_P001 | Maize | extracellular, plasma membrane | 55.0 | 55.76 |
| Zm00001d005504_P001 | Maize | cytosol, extracellular | 56.82 | 55.31 |
| Zm00001d028002_P001 | Maize | mitochondrion | 54.55 | 55.3 |
| TraesCS3B01G272300.1 | Wheat | cytosol | 86.82 | 55.2 |
| Zm00001d037004_P002 | Maize | cytosol | 71.36 | 54.7 |
| GSMUA_Achr7P10970_001 | Banana | cytosol | 62.27 | 54.15 |
| Zm00001d021246_P002 | Maize | cytosol | 51.82 | 45.97 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | UniProt:A0A1D6NGC3 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | ProteinID:ONM39483.1 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF872 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | UniParc:UPI000221E992 | EnsemblPlantsGene:Zm00001d043935 | EnsemblPlants:Zm00001d043935_P001 | EnsemblPlants:Zm00001d043935_T001 | : |
Description
Ras-related protein RABA1f
Coordinates
chr3:-:214160559..214162270
Molecular Weight (calculated)
24172.3 Da
IEP (calculated)
5.158
GRAVY (calculated)
-0.275
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGYRAEEE YDYLFKVVLI GDSGVGKSNL LSRFARDEFS LETRSTIGVE FATKTVQVDD KLVKAQIWDT AGQERYRAIT SAYYRGAVGA LVVYDVSRRT
101: TFDNAERWLR ELRDHTDANI VVMLVGNKAD LRHLRAVSPE DAAAFAERHG TFSMETSALD ATNVERAFAE VLRQIYHVVS RNALDIGDDP AAPPRGKTID
201: VSAAKDEVSP VNAGGCCSSA
101: TFDNAERWLR ELRDHTDANI VVMLVGNKAD LRHLRAVSPE DAAAFAERHG TFSMETSALD ATNVERAFAE VLRQIYHVVS RNALDIGDDP AAPPRGKTID
201: VSAAKDEVSP VNAGGCCSSA
001: MGAYRAEDDY DYLFKVVLTG DSGVGKSNLL SRFTRNDFSH DSRATIGVEF ATRSIQCDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA VNVDNAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQMIN
201: VGGRDDISAV KKPGCCSA
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAISTEE AKAFAERENT FFMETSALEA VNVDNAFTEV LTQIYRVVSK KALEAGDDPT TALPKGQMIN
201: VGGRDDISAV KKPGCCSA
Arabidopsis Description
RABA1IRas-related protein RABA1i [Source:UniProtKB/Swiss-Prot;Acc:Q9S810]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.