CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76522	Canola	cytosol	85.65	88.02
AT4G18430.1	Thale cress	cytosol	83.86	86.18
CDY55638	Canola	cytosol	82.51	84.79
CDY01540	Canola	cytosol	82.51	84.79
PGSC0003DMT400033395	Potato	cytosol	74.44	76.85
Solyc03g006270.2.1	Tomato	cytosol	74.44	76.85
VIT_10s0003g00550.t01	Wine grape	cytosol	73.54	75.58
PGSC0003DMT400058784	Potato	cytosol	72.2	74.88
KRH30863	Soybean	cytosol	72.65	74.65
EES19950	Sorghum	cytosol	72.2	74.54
TraesCS5D01G188900.1	Wheat	cytosol	72.2	74.54
TraesCS5B01G182200.1	Wheat	cytosol	72.2	74.54
Solyc10g008840.2.1	Tomato	cytosol	71.75	74.42
KRH20359	Soybean	cytosol, endoplasmic reticulum	72.2	74.19
KRH50137	Soybean	cytosol, mitochondrion	72.2	74.19
TraesCS5A01G184100.1	Wheat	golgi, plastid	71.75	74.07
TraesCS7B01G200600.1	Wheat	cytosol	71.75	74.07
Os09t0327100-01	Rice	plasma membrane	71.75	74.07
OQU89311	Sorghum	cytosol	71.75	74.07
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	71.75	74.07
HORVU5Hr1G056470.1	Barley	cytosol, plasma membrane	71.75	74.07
KRH32712	Soybean	cytosol, endoplasmic reticulum, mitochondrion	71.75	73.73
TraesCS1A01G398400.1	Wheat	cytosol	71.3	73.61
TraesCS7A01G285200.1	Wheat	cytosol	71.3	73.61
TraesCS7D01G289000.1	Wheat	cytosol	71.3	73.61
CDX79548	Canola	cytosol	65.02	73.6
GSMUA_Achr5P09130_001	Banana	cytosol	71.3	73.27
TraesCS1B01G426300.1	Wheat	cytosol	70.85	73.15
TraesCS1D01G405900.1	Wheat	cytosol	70.85	73.15
CDX90160	Canola	cytosol	70.4	73.02
CDX94631	Canola	cytosol	71.3	72.94
Os05t0564400-02	Rice	plasma membrane	70.85	72.81
CDY35757	Canola	cytosol	70.85	72.48
CDY34094	Canola	cytosol	70.85	72.48
CDY30818	Canola	cytosol	70.85	72.48
CDY20100	Canola	cytosol	70.85	72.48
CDY15659	Canola	cytosol	70.85	72.48
GSMUA_Achr3P15540_001	Banana	cytosol	69.96	72.22
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	69.96	72.22
CDX87774	Canola	cytosol	69.96	72.22
GSMUA_Achr8P27180_001	Banana	cytosol	69.51	71.76
CDX82451	Canola	cytosol	69.96	71.56
CDY64916	Canola	cytosol	68.61	71.16
CDX99430	Canola	cytosol	68.16	71.03
GSMUA_Achr1P11940_001	Banana	cytosol	68.61	70.83
CDY62557	Canola	cytosol	68.16	70.7
CDX75804	Canola	cytosol	69.06	70.64
GSMUA_Achr4P02760_001	Banana	cytosol	59.19	69.47
TraesCS3A01G247000.1	Wheat	cytosol	66.82	68.35
TraesCS3D01G244500.1	Wheat	cytosol	66.82	68.35
GSMUA_Achr1P04780_001	Banana	cytosol	60.99	68.0
OQU87300	Sorghum	cytosol	65.47	66.67
Zm00001d043935_P001	Maize	cytosol	65.02	65.91
GSMUA_Achr7P14790_001	Banana	cytosol	56.5	65.62
CDY06210	Canola	cytosol	65.47	65.47
CDX96799	Canola	cytosol	63.23	65.28
CDY09976	Canola	cytosol	65.02	65.02
CDY35128	Canola	cytosol	62.78	64.81
CDY40023	Canola	cytosol	61.88	63.89
CDY33014	Canola	cytosol	58.74	60.37
CDY50888	Canola	cytosol	57.85	59.45
CDX93495	Canola	cytosol	57.4	58.99
CDY02867	Canola	cytosol	57.4	58.99
CDY32661	Canola	cytosol	57.4	58.99
CDY06256	Canola	cytosol	56.5	58.88
CDY09919	Canola	cytosol	56.5	58.88
CDY06703	Canola	cytosol	56.5	58.33
CDY71720	Canola	cytosol	55.61	57.14
CDY00758	Canola	cytosol	55.61	56.11
CDX73833	Canola	cytosol	55.61	56.11
CDY50568	Canola	cytosol	55.16	55.41
CDY52622	Canola	cytosol	55.16	55.41
CDY08447	Canola	cytosol	54.71	54.95
CDY42133	Canola	cytosol	54.71	54.95
CDY54519	Canola	cytosol	54.71	54.71
CDX86332	Canola	cytosol	54.26	54.26
CDX81790	Canola	plastid	63.23	52.81
CDX96994	Canola	cytosol	52.47	52.47
CDX69843	Canola	cytosol	52.02	52.02
CDX86101	Canola	cytosol	58.3	50.78
CDX80299	Canola	cytosol	58.74	50.78
CDY69836	Canola	cytosol	50.67	50.45
GSMUA_Achr7P10970_001	Banana	cytosol	56.95	50.2
CDY18682	Canola	cytosol	50.22	49.78
CDX81274	Canola	cytosol	49.78	48.9
CDX90017	Canola	cytosol	48.88	45.99
CDY15192	Canola	cytosol	48.88	45.99
CDX99094	Canola	cytosol	58.3	45.3
TraesCS3B01G272300.1	Wheat	cytosol	66.82	43.06
CDX69367	Canola	cytosol	33.18	40.22
CDX69369	Canola	cytosol	50.67	27.7

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:A0A078JAG3	UniProt:A0A078JAG3	EnsemblPlants:CDY60884	ProteinID:CDY60884
ProteinID:CDY60884.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00030223001	InterPro:P-loop_NTPase	PFAM:PF00071
PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF872	SMART:SM00173	SMART:SM00174
SMART:SM00175	SMART:SM00176	SMART:SM00177	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase
TIGRFAMs:TIGR00231	UniParc:UPI0004EF3C91	SEG:seg	:	:	:

Description

BnaC01g40910DBnaC01g40910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAG3]

Coordinates

chrLK033926:-:29813..31047

Molecular Weight (calculated)

24986.5 Da

IEP (calculated)

4.995

GRAVY (calculated)

-0.289

Length

223 amino acids

Sequence
(BLAST)

001: MGEYIADEDY DYLFKLVLIG DSSVGKTNLL SRFTKNEFSI ESKATIGVEF ATKSVHVDEK IIKAQLWDTA GQERYRAITS AYYRGSVGAL LVYDITQHVT
101: FENVEQWLKE LRDHTDANIV IMLVGNKADL HHLRAVQEDE AKSFSERENM FFMETSALDA TNVEQAFTHV LTKICRVMSR KAFDGTGDPT SLSKGQTIDL
201: GSKDDVSVVK SSGCCSGRDY LNL

Best Arabidopsis Sequence Match ( AT4G18430.1 )
(BLAST)

001: MGAYRADDDY DYLFKLVLIG DSGVGKSNLL SRFTRNEFSI ESKSTIGVEF ATRSVHVDEK IIKAQLWDTA GQERYRAITS AYYRGAVGAL LVYDITRHIT
101: FENVERWLKE LRDHTDANVV IMLVGNKADL RHLRAVPTEE ARSFSERENM FFMETSALDA TNVEQAFTHV LTQIYRVMSR KALDGTGDPM SLPKGQTIDI
201: GNKDDVTAVK SSGCCSG

Arabidopsis Description

RABA1ERas-related protein RABA1e [Source:UniProtKB/Swiss-Prot;Acc:O49513]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.