Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032424.1-P | Field mustard | cytosol | 99.55 | 99.55 |
| CDY06210 | Canola | cytosol | 99.55 | 99.55 |
| AT1G06400.1 | Thale cress | cytosol | 90.13 | 93.06 |
| KRH27074 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 80.72 | 82.57 |
| KRH22259 | Soybean | cytosol, nucleus | 80.72 | 82.57 |
| Solyc07g055290.2.1 | Tomato | plastid | 77.13 | 78.9 |
| CDY64916 | Canola | cytosol | 73.99 | 76.74 |
| CDX99430 | Canola | cytosol | 73.54 | 76.64 |
| CDY62557 | Canola | cytosol | 73.54 | 76.28 |
| CDX87774 | Canola | cytosol | 73.54 | 75.93 |
| CDX96799 | Canola | cytosol | 73.54 | 75.93 |
| CDY40023 | Canola | cytosol | 73.09 | 75.46 |
| CDY35128 | Canola | cytosol | 73.09 | 75.46 |
| CDX82451 | Canola | cytosol | 69.51 | 71.1 |
| CDX75804 | Canola | cytosol | 68.61 | 70.18 |
| CDY20100 | Canola | cytosol | 68.61 | 70.18 |
| CDX79548 | Canola | cytosol | 61.88 | 70.05 |
| CDX90160 | Canola | cytosol | 67.26 | 69.77 |
| CDX94631 | Canola | cytosol | 68.16 | 69.72 |
| CDY15659 | Canola | cytosol | 68.16 | 69.72 |
| CDY30818 | Canola | cytosol | 68.16 | 69.72 |
| CDY34094 | Canola | cytosol | 68.16 | 69.72 |
| CDY35757 | Canola | cytosol | 67.26 | 68.81 |
| CDY01540 | Canola | cytosol | 66.82 | 68.66 |
| CDY55638 | Canola | cytosol | 66.82 | 68.66 |
| CDX76522 | Canola | cytosol | 66.82 | 68.66 |
| CDY60884 | Canola | cytosol | 65.02 | 65.02 |
| CDX93495 | Canola | cytosol | 63.23 | 64.98 |
| CDY50888 | Canola | cytosol | 63.23 | 64.98 |
| CDY33014 | Canola | cytosol | 62.78 | 64.52 |
| CDY02867 | Canola | cytosol | 62.33 | 64.06 |
| CDY32661 | Canola | cytosol | 62.33 | 64.06 |
| CDY09919 | Canola | cytosol | 61.44 | 64.02 |
| CDY06256 | Canola | cytosol | 61.44 | 64.02 |
| CDY06703 | Canola | cytosol | 61.44 | 63.43 |
| CDY71720 | Canola | cytosol | 60.99 | 62.67 |
| CDX81790 | Canola | plastid | 73.54 | 61.42 |
| CDX73833 | Canola | cytosol | 57.4 | 57.92 |
| CDY00758 | Canola | cytosol | 57.4 | 57.92 |
| CDY50568 | Canola | cytosol | 56.95 | 57.21 |
| CDY52622 | Canola | cytosol | 56.95 | 57.21 |
| CDX69843 | Canola | cytosol | 56.95 | 56.95 |
| CDX96994 | Canola | cytosol | 56.95 | 56.95 |
| CDY08447 | Canola | cytosol | 56.05 | 56.31 |
| CDY42133 | Canola | cytosol | 56.05 | 56.31 |
| CDX86332 | Canola | cytosol | 56.05 | 56.05 |
| CDY54519 | Canola | cytosol | 55.61 | 55.61 |
| CDY18682 | Canola | cytosol | 55.61 | 55.11 |
| CDX86101 | Canola | cytosol | 63.23 | 55.08 |
| CDY69836 | Canola | cytosol | 55.16 | 54.91 |
| CDX80299 | Canola | cytosol | 63.23 | 54.65 |
| CDX81274 | Canola | cytosol | 55.16 | 54.19 |
| CDX99094 | Canola | cytosol | 63.23 | 49.13 |
| CDX90017 | Canola | cytosol | 47.98 | 45.15 |
| CDY15192 | Canola | cytosol | 47.98 | 45.15 |
| CDX69367 | Canola | cytosol | 36.32 | 44.02 |
| CDX69369 | Canola | cytosol | 54.71 | 29.9 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078F9C4 | UniProt:A0A078F9C4 | EnsemblPlants:CDY09976 | ProteinID:CDY09976 |
| ProteinID:CDY09976.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00031750001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 |
| PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF544 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 |
| SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EC66FA |
Description
BnaC08g44750DBnaC08g44750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9C4]
Coordinates
chrLK032000:+:312385..313582
Molecular Weight (calculated)
24761.4 Da
IEP (calculated)
8.053
GRAVY (calculated)
-0.346
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSYKVDEE YDYLFKLVLI GDSGVGKSNL LSRFTKNEFN LESKSTIGVE FATKTLRVDS KVVKAQIWDT AGQERYRAIT SAYYRGAVGA LLVYDVTRHS
101: TFENAARWLR ELRGHTDPNI VVMLIGNKCD LRHLVAIKTE EAKAFAERES LYFMETSALD ATNVENAFTE VLAQIHKIVS KRSVDGTNRE GEGGSSSGLP
201: KKGETINVKE DGSVLKRMGC CSN
101: TFENAARWLR ELRGHTDPNI VVMLIGNKCD LRHLVAIKTE EAKAFAERES LYFMETSALD ATNVENAFTE VLAQIHKIVS KRSVDGTNRE GEGGSSSGLP
201: KKGETINVKE DGSVLKRMGC CSN
001: MAGYRADEEY DYLFKLVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATKTTKVEGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LIYDVTRHAT
101: FENAARWLRE LRGHTDPNIV VMLIGNKCDL RHLVAVKTEE AKAFAERESL YFMETSALDA TNVENAFTEV LTQIHKIVSK RSVDGGGESA DLPGKGETIN
201: VKEDGSVLKR MGCCSN
101: FENAARWLRE LRGHTDPNIV VMLIGNKCDL RHLVAVKTEE AKAFAERESL YFMETSALDA TNVENAFTEV LTQIHKIVSK RSVDGGGESA DLPGKGETIN
201: VKEDGSVLKR MGCCSN
Arabidopsis Description
RABA1ARas-related protein RABA1a [Source:UniProtKB/Swiss-Prot;Acc:P28185]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.