Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY69836 | Canola | cytosol | 52.45 | 95.54 |
AT4G39990.1 | Thale cress | cytosol | 49.26 | 89.73 |
CDY18682 | Canola | cytosol | 44.36 | 80.44 |
CDX81274 | Canola | cytosol | 44.12 | 79.3 |
CDX69367 | Canola | cytosol | 34.56 | 76.63 |
Zm00001d014278_P001 | Maize | extracellular, plasma membrane | 40.69 | 76.5 |
KRH59301 | Soybean | cytosol, endoplasmic reticulum | 42.89 | 76.42 |
CDX96994 | Canola | cytosol | 41.67 | 76.23 |
Os10t0377400-01 | Rice | cytosol | 40.2 | 75.93 |
GSMUA_Achr3P21290_001 | Banana | cytosol | 40.69 | 75.8 |
GSMUA_Achr3P01690_001 | Banana | cytosol | 40.69 | 75.8 |
CDX69843 | Canola | cytosol | 41.42 | 75.78 |
OQU91938 | Sorghum | cytosol | 39.71 | 74.65 |
TraesCS1B01G152100.1 | Wheat | cytosol | 39.46 | 74.54 |
TraesCS1A01G131500.2 | Wheat | cytosol | 39.46 | 74.54 |
TraesCS1D01G136900.1 | Wheat | cytosol | 39.46 | 74.54 |
GSMUA_Achr8P18090_001 | Banana | cytosol | 39.71 | 74.31 |
EER92725 | Sorghum | cytosol | 39.22 | 73.73 |
Zm00001d028002_P001 | Maize | mitochondrion | 39.22 | 73.73 |
Zm00001d048222_P001 | Maize | extracellular, plasma membrane | 38.97 | 73.27 |
KRH43151 | Soybean | cytosol, endoplasmic reticulum | 41.91 | 72.15 |
CDX86332 | Canola | cytosol | 36.52 | 66.82 |
CDX73833 | Canola | cytosol | 36.03 | 66.52 |
CDY00758 | Canola | cytosol | 36.03 | 66.52 |
CDY54519 | Canola | cytosol | 36.27 | 66.37 |
CDY52622 | Canola | cytosol | 36.03 | 66.22 |
CDY50568 | Canola | cytosol | 36.03 | 66.22 |
CDY08447 | Canola | cytosol | 35.78 | 65.77 |
CDY42133 | Canola | cytosol | 35.78 | 65.77 |
CDY50888 | Canola | cytosol | 32.11 | 60.37 |
CDX93495 | Canola | cytosol | 31.86 | 59.91 |
CDX96799 | Canola | cytosol | 31.37 | 59.26 |
CDY64916 | Canola | cytosol | 31.13 | 59.07 |
CDY62557 | Canola | cytosol | 30.88 | 58.6 |
CDY33014 | Canola | cytosol | 31.13 | 58.53 |
CDX99430 | Canola | cytosol | 30.64 | 58.41 |
CDY35128 | Canola | cytosol | 30.88 | 58.33 |
CDX90160 | Canola | cytosol | 30.64 | 58.14 |
CDY32661 | Canola | cytosol | 30.88 | 58.06 |
CDY02867 | Canola | cytosol | 30.88 | 58.06 |
CDY09919 | Canola | cytosol | 30.39 | 57.94 |
CDY06256 | Canola | cytosol | 30.39 | 57.94 |
CDY71720 | Canola | cytosol | 30.64 | 57.6 |
HORVU1Hr1G034400.4 | Barley | plasma membrane | 38.48 | 57.51 |
CDY40023 | Canola | cytosol | 30.39 | 57.41 |
CDY35757 | Canola | cytosol | 30.64 | 57.34 |
CDY20100 | Canola | cytosol | 30.64 | 57.34 |
CDY06703 | Canola | cytosol | 30.15 | 56.94 |
CDY30818 | Canola | cytosol | 30.39 | 56.88 |
CDX94631 | Canola | cytosol | 30.39 | 56.88 |
CDY34094 | Canola | cytosol | 30.39 | 56.88 |
CDY15659 | Canola | cytosol | 30.39 | 56.88 |
CDX87774 | Canola | cytosol | 29.9 | 56.48 |
CDX82451 | Canola | cytosol | 30.15 | 56.42 |
CDY15192 | Canola | cytosol | 32.6 | 56.12 |
CDX75804 | Canola | cytosol | 29.9 | 55.96 |
CDX90017 | Canola | cytosol | 32.35 | 55.7 |
CDY06210 | Canola | cytosol | 30.15 | 55.16 |
CDY09976 | Canola | cytosol | 29.9 | 54.71 |
CDY01540 | Canola | cytosol | 28.68 | 53.92 |
CDX76522 | Canola | cytosol | 28.68 | 53.92 |
CDY55638 | Canola | cytosol | 28.68 | 53.92 |
CDX79548 | Canola | cytosol | 25.98 | 53.81 |
CDY60884 | Canola | cytosol | 27.7 | 50.67 |
CDX80299 | Canola | cytosol | 31.37 | 49.61 |
CDX86101 | Canola | cytosol | 30.64 | 48.83 |
CDX81790 | Canola | plastid | 30.39 | 46.44 |
CDX99094 | Canola | cytosol | 30.64 | 43.55 |
Protein Annotations
MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:A0A078BZI5 | EnsemblPlants:CDX69369 | ProteinID:CDX69369 | ProteinID:CDX69369.1 |
GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 |
GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00131221001 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
PANTHER:PTHR24073 | PANTHER:PTHR24073:SF863 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
SMART:SM00177 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 | UniParc:UPI0004EE8D7F |
SEG:seg | : | : | : | : | : |
Description
BnaC01g00840D
Coordinates
chrLK031789:-:4400569..4403763
Molecular Weight (calculated)
43718.6 Da
IEP (calculated)
6.407
GRAVY (calculated)
-0.175
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGGGGYGGA SGKVDYVFKV VLIGDSAVGK SQLLARFARD EFSLDSKATI GVEFQTRTLT IEEKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: KRETFDHIPR WLEELRAHAD KNIVIILIGN KSDLEDQRAI PTEDAKEFAE KEGLFFLETS ALNATNVENS FNTLMTEIFN TVNKKSLSSV GESNNPGSLA
201: GQKIVIPGPG QESTVVTITV KMALTFQHPM AIVDEFTLTA SDPSFWVPGG TKKPYPNGTI TGNPSDVMRN EQELPSHSLA DCFSCIFGSR PFHFPFCTGG
301: GGTTSLPNST VPSLPVLSFS SFKPLSEASS SSTTISSLFS SGTCNLTKKM PSEDFSNGPP NIRSIHSIHD GIAAVLNASV SASPSTGNTG KSQWSKNILQ
401: SVKLGLIS
101: KRETFDHIPR WLEELRAHAD KNIVIILIGN KSDLEDQRAI PTEDAKEFAE KEGLFFLETS ALNATNVENS FNTLMTEIFN TVNKKSLSSV GESNNPGSLA
201: GQKIVIPGPG QESTVVTITV KMALTFQHPM AIVDEFTLTA SDPSFWVPGG TKKPYPNGTI TGNPSDVMRN EQELPSHSLA DCFSCIFGSR PFHFPFCTGG
301: GGTTSLPNST VPSLPVLSFS SFKPLSEASS SSTTISSLFS SGTCNLTKKM PSEDFSNGPP NIRSIHSIHD GIAAVLNASV SASPSTGNTG KSQWSKNILQ
401: SVKLGLIS
001: MAGGGGYGGA SGKVDYVFKV VLIGDSAVGK SQLLARFARD EFSMDSKATI GVEFQTRTLS IEQKSIKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDMT
101: KRETFEHIPR WLEELRAHAD KNIVIILIGN KSDLEDQRAV PTEDAKEFAE KEGLFFLETS ALNATNVENS FNTLMTQIYN TVNKKNLASE GDSNNPGSLA
201: GKKILIPGSG QEIPAKTSTC CTSS
101: KRETFEHIPR WLEELRAHAD KNIVIILIGN KSDLEDQRAV PTEDAKEFAE KEGLFFLETS ALNATNVENS FNTLMTQIYN TVNKKNLASE GDSNNPGSLA
201: GKKILIPGSG QEIPAKTSTC CTSS
Arabidopsis Description
RABA4BRas-related protein RABA4b [Source:UniProtKB/Swiss-Prot;Acc:Q9SMQ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.