Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69836 Canola cytosol 52.45 95.54
AT4G39990.1 Thale cress cytosol 49.26 89.73
CDY18682 Canola cytosol 44.36 80.44
CDX81274 Canola cytosol 44.12 79.3
CDX69367 Canola cytosol 34.56 76.63
Zm00001d014278_P001 Maize extracellular, plasma membrane 40.69 76.5
KRH59301 Soybean cytosol, endoplasmic reticulum 42.89 76.42
CDX96994 Canola cytosol 41.67 76.23
Os10t0377400-01 Rice cytosol 40.2 75.93
GSMUA_Achr3P21290_001 Banana cytosol 40.69 75.8
GSMUA_Achr3P01690_001 Banana cytosol 40.69 75.8
CDX69843 Canola cytosol 41.42 75.78
OQU91938 Sorghum cytosol 39.71 74.65
TraesCS1B01G152100.1 Wheat cytosol 39.46 74.54
TraesCS1A01G131500.2 Wheat cytosol 39.46 74.54
TraesCS1D01G136900.1 Wheat cytosol 39.46 74.54
GSMUA_Achr8P18090_001 Banana cytosol 39.71 74.31
EER92725 Sorghum cytosol 39.22 73.73
Zm00001d028002_P001 Maize mitochondrion 39.22 73.73
Zm00001d048222_P001 Maize extracellular, plasma membrane 38.97 73.27
KRH43151 Soybean cytosol, endoplasmic reticulum 41.91 72.15
CDX86332 Canola cytosol 36.52 66.82
CDX73833 Canola cytosol 36.03 66.52
CDY00758 Canola cytosol 36.03 66.52
CDY54519 Canola cytosol 36.27 66.37
CDY52622 Canola cytosol 36.03 66.22
CDY50568 Canola cytosol 36.03 66.22
CDY08447 Canola cytosol 35.78 65.77
CDY42133 Canola cytosol 35.78 65.77
CDY50888 Canola cytosol 32.11 60.37
CDX93495 Canola cytosol 31.86 59.91
CDX96799 Canola cytosol 31.37 59.26
CDY64916 Canola cytosol 31.13 59.07
CDY62557 Canola cytosol 30.88 58.6
CDY33014 Canola cytosol 31.13 58.53
CDX99430 Canola cytosol 30.64 58.41
CDY35128 Canola cytosol 30.88 58.33
CDX90160 Canola cytosol 30.64 58.14
CDY32661 Canola cytosol 30.88 58.06
CDY02867 Canola cytosol 30.88 58.06
CDY09919 Canola cytosol 30.39 57.94
CDY06256 Canola cytosol 30.39 57.94
CDY71720 Canola cytosol 30.64 57.6
HORVU1Hr1G034400.4 Barley plasma membrane 38.48 57.51
CDY40023 Canola cytosol 30.39 57.41
CDY35757 Canola cytosol 30.64 57.34
CDY20100 Canola cytosol 30.64 57.34
CDY06703 Canola cytosol 30.15 56.94
CDY30818 Canola cytosol 30.39 56.88
CDX94631 Canola cytosol 30.39 56.88
CDY34094 Canola cytosol 30.39 56.88
CDY15659 Canola cytosol 30.39 56.88
CDX87774 Canola cytosol 29.9 56.48
CDX82451 Canola cytosol 30.15 56.42
CDY15192 Canola cytosol 32.6 56.12
CDX75804 Canola cytosol 29.9 55.96
CDX90017 Canola cytosol 32.35 55.7
CDY06210 Canola cytosol 30.15 55.16
CDY09976 Canola cytosol 29.9 54.71
CDY01540 Canola cytosol 28.68 53.92
CDX76522 Canola cytosol 28.68 53.92
CDY55638 Canola cytosol 28.68 53.92
CDX79548 Canola cytosol 25.98 53.81
CDY60884 Canola cytosol 27.7 50.67
CDX80299 Canola cytosol 31.37 49.61
CDX86101 Canola cytosol 30.64 48.83
CDX81790 Canola plastid 30.39 46.44
CDX99094 Canola cytosol 30.64 43.55
Protein Annotations
MapMan:22.8.1.1Gene3D:3.40.50.300GO:A0A078BZI5EnsemblPlants:CDX69369ProteinID:CDX69369ProteinID:CDX69369.1
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005525
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00131221001InterPro:P-loop_NTPasePFAM:PF00071PRINTS:PR00449PFscan:PS51419
PANTHER:PTHR24073PANTHER:PTHR24073:SF863SMART:SM00173SMART:SM00174SMART:SM00175SMART:SM00176
SMART:SM00177SUPFAM:SSF52540InterPro:Small_GTP-bd_domInterPro:Small_GTPaseTIGRFAMs:TIGR00231UniParc:UPI0004EE8D7F
SEG:seg:::::
Description
BnaC01g00840D
Coordinates
chrLK031789:-:4400569..4403763
Molecular Weight (calculated)
43718.6 Da
IEP (calculated)
6.407
GRAVY (calculated)
-0.175
Length
408 amino acids
Sequence
(BLAST)
001: MAGGGGYGGA SGKVDYVFKV VLIGDSAVGK SQLLARFARD EFSLDSKATI GVEFQTRTLT IEEKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: KRETFDHIPR WLEELRAHAD KNIVIILIGN KSDLEDQRAI PTEDAKEFAE KEGLFFLETS ALNATNVENS FNTLMTEIFN TVNKKSLSSV GESNNPGSLA
201: GQKIVIPGPG QESTVVTITV KMALTFQHPM AIVDEFTLTA SDPSFWVPGG TKKPYPNGTI TGNPSDVMRN EQELPSHSLA DCFSCIFGSR PFHFPFCTGG
301: GGTTSLPNST VPSLPVLSFS SFKPLSEASS SSTTISSLFS SGTCNLTKKM PSEDFSNGPP NIRSIHSIHD GIAAVLNASV SASPSTGNTG KSQWSKNILQ
401: SVKLGLIS
Best Arabidopsis Sequence Match ( AT4G39990.1 )
(BLAST)
001: MAGGGGYGGA SGKVDYVFKV VLIGDSAVGK SQLLARFARD EFSMDSKATI GVEFQTRTLS IEQKSIKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDMT
101: KRETFEHIPR WLEELRAHAD KNIVIILIGN KSDLEDQRAV PTEDAKEFAE KEGLFFLETS ALNATNVENS FNTLMTQIYN TVNKKNLASE GDSNNPGSLA
201: GKKILIPGSG QEIPAKTSTC CTSS
Arabidopsis Description
RABA4BRas-related protein RABA4b [Source:UniProtKB/Swiss-Prot;Acc:Q9SMQ6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.