Factsheet for Os10t0377400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014278_P001	Maize	extracellular, plasma membrane	96.76	96.31
OQU91938	Sorghum	cytosol	96.3	95.85
TraesCS1D01G136900.1	Wheat	cytosol	95.83	95.83
TraesCS1B01G152100.1	Wheat	cytosol	95.83	95.83
TraesCS1A01G131500.2	Wheat	cytosol	95.83	95.83
GSMUA_Achr3P01690_001	Banana	cytosol	83.8	82.65
GSMUA_Achr8P18090_001	Banana	cytosol	83.33	82.57
GSMUA_Achr3P21290_001	Banana	cytosol	81.94	80.82
Solyc11g010100.1.1	Tomato	cytosol	83.33	80.36
PGSC0003DMT400041813	Potato	cytosol	83.33	80.36
KRH31313	Soybean	endoplasmic reticulum	82.41	79.82
KRG97554	Soybean	cytosol, endoplasmic reticulum	81.48	78.92
VIT_07s0191g00030.t01	Wine grape	cytosol	82.41	78.76
PGSC0003DMT400060649	Potato	cytosol	79.63	77.48
Solyc04g012180.2.1	Tomato	cytosol, unclear	79.63	77.48
CDX69843	Canola	cytosol	78.24	75.78
AT5G65270.1	Thale cress	cytosol	79.17	75.66
Bra037810.1-P	Field mustard	cytosol	78.7	75.56
CDY18682	Canola	cytosol	78.7	75.56
Bra009040.1-P	Field mustard	cytosol	77.78	75.34
Bra011818.1-P	Field mustard	cytosol	77.78	75.34
CDX96994	Canola	cytosol	77.78	75.34
CDY69836	Canola	cytosol	77.78	75.0
KRH59301	Soybean	cytosol, endoplasmic reticulum	79.17	74.67
CDX81274	Canola	cytosol	78.24	74.45
HORVU1Hr1G034400.4	Barley	plasma membrane	93.98	74.36
AT4G39990.1	Thale cress	cytosol	75.46	72.77
KRH43151	Soybean	cytosol, endoplasmic reticulum	75.93	69.2
Os01t0848700-01	Rice	cytosol, plasma membrane	63.89	63.89
Os03t0823700-01	Rice	plasma membrane	62.04	62.33
CDX69367	Canola	cytosol	52.78	61.96
Os05t0564400-02	Rice	plasma membrane	59.72	59.45
Os05t0105100-01	Rice	golgi, plasma membrane	60.19	59.09
Os06t0551400-01	Rice	cytosol, golgi, plasma membrane, plastid	59.26	58.99
Os09t0327100-01	Rice	plasma membrane	58.8	58.8
Os03t0843100-01	Rice	cytosol	60.19	58.3
Os06t0714600-01	Rice	cytosol	57.87	55.56
Os09t0527600-01	Rice	cytosol, plasma membrane	55.09	49.79
CDX69369	Canola	cytosol	75.93	40.2

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EntrezGene:4348493	ProteinID:ABB47387.1	EMBL:AK111872	ProteinID:BAF26390.1
ProteinID:BAT10603.1	ProteinID:EEE50861.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005794	GO:GO:0005886	GO:GO:0016020	GO:GO:0016787	EnsemblPlantsGene:Os10g0377400
EnsemblPlants:Os10t0377400-01	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF647	UniProt:Q338Z5	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176
SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI00005E1DB7	RefSeq:XP_015614702.1

Description

small GTP-binding protein OsRab11E1Similar to Ras-related protein Rab11D. (Os10t0377400-01);Similar to Ras-related protein Rab11D. (Os10t0377400-02);Non-protein coding transcript. (Os10t0377400-03)

Coordinates

chr10:-:12048114..12052937

Molecular Weight (calculated)

23813.5 Da

IEP (calculated)

8.209

GRAVY (calculated)

-0.243

Length

216 amino acids

Sequence
(BLAST)

001: MAGGEKVDYV FKVVLIGDSA VGKSQILARF ARNEFSIDSK ATIGVEFQTR TLLIDHKSVK AQIWDTAGQE RYRAVTSAYY RGALGALLVY DITKRQSFDH
101: IPRWLEELRG HADKNIVIML VGNKSDLEDE RAVSTEDAKE FAEKENLFFL ETSALQATNV ENAFQTVLSE IFKIHSKKNM AADPKANGAA PSLAGKKVVV
201: PGPAQEIPKS KCCSSM

Best Arabidopsis Sequence Match ( AT5G65270.1 )
(BLAST)

001: MTSGGGYGDP SQKIDYVFKV VLIGDSAVGK SQILARYARD EFSLDSKATI GVEFQTRTLV IDHKSVKAQI WDTAGQERYR AVTSAYYRGA VGAMLVYDIT
101: RRQTFDHIPR WLEELRAHAD KNIVIILIGN KSDLVDQRAI PTEDAKEFAE KEGLFFLETS AFNATNVESA FSTVLTEIFN IVNKKSLAAS EDQENGNPGS
201: LAGKKIDIVP GPGQVIPNKS NMCCNS

Arabidopsis Description

RABA4ARABA4a [Source:UniProtKB/TrEMBL;Acc:A0A178UKD0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.