Factsheet for Bra021589.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20100	Canola	cytosol	100.0	100.0
AT3G15060.1	Thale cress	cytosol	90.83	91.24
Bra001581.1-P	Field mustard	cytosol	90.37	90.37
KRH50137	Soybean	cytosol, mitochondrion	85.78	86.18
TraesCS7B01G200600.1	Wheat	cytosol	84.86	85.65
KRH20359	Soybean	cytosol, endoplasmic reticulum	84.86	85.25
VIT_10s0003g00550.t01	Wine grape	cytosol	84.86	85.25
TraesCS7D01G289000.1	Wheat	cytosol	84.4	85.19
HORVU5Hr1G056470.1	Barley	cytosol, plasma membrane	84.4	85.19
TraesCS7A01G285200.1	Wheat	cytosol	84.4	85.19
TraesCS5A01G184100.1	Wheat	golgi, plastid	84.4	85.19
EES19950	Sorghum	cytosol	83.94	84.72
OQU89311	Sorghum	cytosol	83.94	84.72
Os09t0327100-01	Rice	plasma membrane	83.94	84.72
TraesCS5B01G182200.1	Wheat	cytosol	83.94	84.72
TraesCS1A01G398400.1	Wheat	cytosol	83.94	84.72
TraesCS5D01G188900.1	Wheat	cytosol	83.94	84.72
TraesCS1B01G426300.1	Wheat	cytosol	83.49	84.26
TraesCS1D01G405900.1	Wheat	cytosol	83.49	84.26
Os05t0564400-02	Rice	plasma membrane	83.03	83.41
KRH32712	Soybean	cytosol, endoplasmic reticulum, mitochondrion	83.03	83.41
Zm00001d009572_P001	Maize	cytosol, mitochondrion, plasma membrane	82.57	83.33
KRH30863	Soybean	cytosol	82.57	82.95
Zm00001d039016_P001	Maize	cytosol, mitochondrion, plasma membrane	82.11	82.87
Bra010860.1-P	Field mustard	cytosol	81.19	82.33
PGSC0003DMT400033395	Potato	cytosol	81.19	81.94
PGSC0003DMT400058784	Potato	cytosol	80.73	81.86
Bra032914.1-P	Field mustard	cytosol	81.65	81.65
GSMUA_Achr5P09130_001	Banana	cytosol	81.19	81.57
Solyc03g006270.2.1	Tomato	cytosol	80.73	81.48
Solyc10g008840.2.1	Tomato	cytosol	80.28	81.4
Bra030105.1-P	Field mustard	cytosol	80.73	80.73
GSMUA_Achr3P15540_001	Banana	cytosol	78.9	79.63
Bra022959.1-P	Field mustard	cytosol	79.36	79.36
GSMUA_Achr8P27180_001	Banana	cytosol	77.98	78.7
GSMUA_Achr1P11940_001	Banana	cytosol	77.98	78.7
Bra021009.1-P	Field mustard	cytosol	77.52	77.88
Bra012597.1-P	Field mustard	cytosol	76.61	76.96
GSMUA_Achr4P02760_001	Banana	cytosol	66.51	76.32
TraesCS3A01G247000.1	Wheat	cytosol	75.23	75.23
TraesCS3D01G244500.1	Wheat	cytosol	75.23	75.23
GSMUA_Achr7P14790_001	Banana	cytosol	66.06	75.0
GSMUA_Achr1P04780_001	Banana	cytosol	66.51	72.5
Zm00001d043935_P001	Maize	cytosol	72.94	72.27
Bra026016.1-P	Field mustard	cytosol	71.56	72.22
OQU87300	Sorghum	cytosol	72.02	71.69
Bra032424.1-P	Field mustard	cytosol	70.18	68.61
Bra020006.1-P	Field mustard	cytosol	67.89	68.2
Bra002589.1-P	Field mustard	cytosol	66.06	66.36
Bra015578.1-P	Field mustard	cytosol	65.6	66.2
Bra018190.1-P	Field mustard	cytosol	65.14	65.44
Bra020334.1-P	Field mustard	cytosol	63.76	64.06
Bra001439.1-P	Field mustard	cytosol	59.63	58.82
GSMUA_Achr7P10970_001	Banana	cytosol	67.89	58.5
Bra038701.1-P	Field mustard	cytosol	59.17	58.11
Bra037516.1-P	Field mustard	cytosol	58.72	57.4
Bra009040.1-P	Field mustard	cytosol	58.72	57.4
Bra011818.1-P	Field mustard	cytosol	57.34	56.05
Bra031573.1-P	Field mustard	cytosol	64.22	54.69
Bra037810.1-P	Field mustard	cytosol	56.42	54.67
Bra033277.1-P	Field mustard	cytosol	53.67	49.37
Bra034771.1-P	Field mustard	cytosol	58.72	48.67
TraesCS3B01G272300.1	Wheat	cytosol	75.23	47.4

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra021589	EnsemblPlants:Bra021589.1	EnsemblPlants:Bra021589.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787
UniProt:M4DYJ3	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF649	SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540
InterPro:Small_GTP-bd_dom	InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI0002544183	:	:

Description

AT3G15060 (E=9e-110) AtRABA1g | AtRABA1g (Arabidopsis Rab GTPase homolog A1g); GTP binding

Coordinates

chrA01:-:24322947..24323690

Molecular Weight (calculated)

24264.6 Da

IEP (calculated)

5.391

GRAVY (calculated)

-0.256

Length

218 amino acids

Sequence
(BLAST)

001: MATYTADDDY DFLYKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRTIHVDDK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTDANIV IMLVGNKADL RHLRAVSTED ATVFAEREKT FFMETSALEA LNVEDAFTQL LSQIYRVASK KALDVGDDDR SGVPKGQSVN
201: VGSKGDVSEV KKIGCCSS

Best Arabidopsis Sequence Match ( AT3G15060.1 )
(BLAST)

001: MAAYRADDDY DFLYKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSIHVDEK IVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHVT
101: FENVERWLKE LRDHTEANIV IMLVGNKADL RHLRAVSTED AKAFAERENT FFMETSALEA LNVENAFTEV LSQIYRVASK KALDIGDDHT TLPKGQSINV
201: GSKDDVSEVK KVGCCSS

Arabidopsis Description

RABA1GRas-related protein RABA1g [Source:UniProtKB/Swiss-Prot;Acc:Q9LK99]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.