Factsheet for TraesCS3A01G289600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G324300.1	Wheat	cytosol, golgi	99.55	99.55
TraesCS3D01G289400.1	Wheat	cytosol	99.09	99.09
EES19812	Sorghum	cytosol	85.52	85.91
GSMUA_Achr4P02540_001	Banana	cytosol	73.76	84.9
GSMUA_Achr3P15680_001	Banana	plasma membrane	82.35	83.87
GSMUA_Achr9P05610_001	Banana	cytosol	81.45	83.72
KRH27364	Soybean	endoplasmic reticulum	81.0	82.49
AT1G16920.1	Thale cress	cytosol	80.54	82.41
GSMUA_Achr8P27780_001	Banana	cytosol	66.97	82.22
KRH21946	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	80.54	82.03
CDY35128	Canola	cytosol	80.09	81.94
Bra026016.1-P	Field mustard	cytosol	79.64	81.48
CDY40023	Canola	cytosol	79.19	81.02
CDX96799	Canola	cytosol	79.19	81.02
TraesCS7A01G354400.1	Wheat	golgi	79.19	80.65
GSMUA_Achr6P31790_001	Banana	cytosol	60.18	80.12
TraesCS5A01G184100.1	Wheat	golgi, plastid	75.57	77.31
HORVU3Hr1G071740.1	Barley	plastid	99.55	76.92
TraesCS7A01G285200.1	Wheat	cytosol	72.85	74.54
TraesCS1A01G398400.1	Wheat	cytosol	71.95	73.61
VIT_19s0014g01160.t01	Wine grape	extracellular	82.81	72.62
TraesCS3A01G247000.1	Wheat	cytosol	66.97	67.89
TraesCS3A01G364100.1	Wheat	cytosol	65.61	67.13
TraesCS5A01G485100.1	Wheat	cytosol, golgi	63.35	65.12
TraesCS4A01G343500.1	Wheat	cytosol	66.06	64.89
CDX81790	Canola	plastid	78.28	64.79
TraesCS1A01G015400.1	Wheat	cytosol	62.9	62.33
TraesCS1A01G131500.2	Wheat	cytosol	57.92	59.26
TraesCS5A01G176000.1	Wheat	cytosol	57.47	56.19
TraesCS5A01G315700.1	Wheat	cytosol	50.68	45.34

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006810	GO:GO:0006950	GO:GO:0008150
GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0042538	GO:GO:0060627
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073	PANTHER:PTHR24073:SF544
SMART:SM00173	SMART:SM00174	SMART:SM00175	SMART:SM00176	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	EnsemblPlantsGene:TraesCS3A01G289600	EnsemblPlants:TraesCS3A01G289600.1	TIGR:cd01868	:

Description

No Description!

Coordinates

chr3A:+:518630204..518634147

Molecular Weight (calculated)

24046.0 Da

IEP (calculated)

4.836

GRAVY (calculated)

-0.284

Length

221 amino acids

Sequence
(BLAST)

001: MAGSGGGAYR AEDDYDYLFK AVIIGDSGVG KSNLLSRFTK NEFCLESKST IGVEFATRSL QVDGKVVKAQ IWDTAGQERY RAITSAYYRG AVGALLVYDV
101: TRRATFDNVA RWLKELRDHT DASIVVMLVG NKSDLRHLVA VSTEDGQEYA EAESLYFMET SALDATNVDN AFSEVLTQIY RIASRKTVDA GDDGSSAPSK
201: GENINVKDDV SSLKRAGCCS S

Best Arabidopsis Sequence Match ( AT1G06400.1 )
(BLAST)

001: MAGYRADEEY DYLFKLVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATKTTKVEGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LIYDVTRHAT
101: FENAARWLRE LRGHTDPNIV VMLIGNKCDL RHLVAVKTEE AKAFAERESL YFMETSALDA TNVENAFTEV LTQIHKIVSK RSVDGGGESA DLPGKGETIN
201: VKEDGSVLKR MGCCSN

Arabidopsis Description

RABA1ARas-related protein RABA1a [Source:UniProtKB/Swiss-Prot;Acc:P28185]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.