Factsheet for GSMUA_Achr4P02540_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P31790_001	Banana	cytosol	73.44	84.94
GSMUA_Achr3P15680_001	Banana	plasma membrane	89.58	79.26
GSMUA_Achr9P05610_001	Banana	cytosol	88.54	79.07
KRH27364	Soybean	endoplasmic reticulum	85.94	76.04
KRH21946	Soybean	cytosol, endoplasmic reticulum, mitochondrion, nucleus	85.42	75.58
GSMUA_Achr8P27780_001	Banana	cytosol	70.83	75.56
AT1G16920.1	Thale cress	cytosol	84.38	75.0
CDY35128	Canola	cytosol	84.38	75.0
GSMUA_Achr4P02760_001	Banana	cytosol	73.96	74.74
Bra026016.1-P	Field mustard	cytosol	83.33	74.07
CDY40023	Canola	cytosol	83.33	74.07
TraesCS3A01G289600.1	Wheat	cytosol	84.9	73.76
TraesCS3B01G324300.1	Wheat	cytosol, golgi	84.9	73.76
CDX96799	Canola	cytosol	82.81	73.61
TraesCS3D01G289400.1	Wheat	cytosol	84.38	73.3
EES19812	Sorghum	cytosol	81.77	71.36
GSMUA_Achr7P14790_001	Banana	cytosol	71.35	71.35
GSMUA_Achr1P04780_001	Banana	cytosol	72.92	70.0
VIT_19s0014g01160.t01	Wine grape	extracellular	89.06	67.86
GSMUA_Achr3P15540_001	Banana	cytosol	75.52	67.13
GSMUA_Achr5P09130_001	Banana	cytosol	73.96	65.44
GSMUA_Achr1P11940_001	Banana	cytosol	72.92	64.81
GSMUA_Achr8P27180_001	Banana	cytosol	72.92	64.81
CDX81790	Canola	plastid	82.81	59.55
GSMUA_Achr6P14930_001	Banana	cytosol	51.56	57.89
HORVU3Hr1G071740.1	Barley	plastid	85.42	57.34
GSMUA_Achr2P05630_001	Banana	cytosol	63.02	56.28
GSMUA_Achr6P28910_001	Banana	cytosol	63.54	56.22
GSMUA_Achr9P03770_001	Banana	cytosol	54.17	55.62
GSMUA_Achr6P18430_001	Banana	cytosol	65.1	55.56
GSMUA_Achr7P10970_001	Banana	cytosol	72.4	54.94
GSMUA_Achr5P28770_001	Banana	cytosol	61.46	54.38
GSMUA_Achr3P11810_001	Banana	cytosol	63.02	53.78
GSMUA_Achr7P26890_001	Banana	cytosol	51.56	52.94
GSMUA_Achr1P16540_001	Banana	cytosol	54.69	52.24
GSMUA_Achr8P02230_001	Banana	plasma membrane	58.33	51.85
GSMUA_Achr1P19620_001	Banana	cytosol	61.98	51.52
GSMUA_Achr3P01690_001	Banana	cytosol	56.25	49.32
GSMUA_Achr8P18090_001	Banana	cytosol	55.73	49.08
GSMUA_Achr3P21290_001	Banana	cytosol	55.21	48.4
GSMUA_Achr3P13850_001	Banana	cytosol	54.17	44.44
GSMUA_Achr9P00860_001	Banana	cytosol	51.04	42.61

Protein Annotations

MapMan:22.8.1.1	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924
GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr4G02540_001	EnsemblPlants:GSMUA_Achr4P02540_001	EnsemblPlants:GSMUA_Achr4T02540_001
UniProt:M0SKH1	InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF592	SMART:SM00173	SMART:SM00174	SMART:SM00175	SUPFAM:SSF52540	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000296C812	:	:	:

Description

Ras-related protein RIC2 [Source:GMGC_GENE;Acc:GSMUA_Achr4G02540_001]

Coordinates

chr4:-:2189797..2193309

Molecular Weight (calculated)

21344.1 Da

IEP (calculated)

5.129

GRAVY (calculated)

-0.260

Length

192 amino acids

Sequence
(BLAST)

001: MAAYRAEDDY DYLFKVSKST IGVEFATRSL TVDGKVVKAQ IWDTAGQERY RAITSAYYRG AIGALLVYDV TRHATFENVE RWLKELRGHT DPNIVVMLIG
101: NKSDLRHLVA VPTEDGEAYA ERESLYFMET SALEATNVEN AFAEVLTQIY RIVSKKAVEA GDDATSTVPS KGERINVKDD VSALKRVGCC SS

Best Arabidopsis Sequence Match ( AT1G06400.1 )
(BLAST)

001: MAGYRADEEY DYLFKLVLIG DSGVGKSNLL SRFTKNEFNL ESKSTIGVEF ATKTTKVEGK VVKAQIWDTA GQERYRAITS AYYRGAVGAL LIYDVTRHAT
101: FENAARWLRE LRGHTDPNIV VMLIGNKCDL RHLVAVKTEE AKAFAERESL YFMETSALDA TNVENAFTEV LTQIHKIVSK RSVDGGGESA DLPGKGETIN
201: VKEDGSVLKR MGCCSN

Arabidopsis Description

RABA1ARas-related protein RABA1a [Source:UniProtKB/Swiss-Prot;Acc:P28185]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.