Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G150900.1 | Wheat | cytosol | 92.17 | 92.17 |
| TraesCS1D01G133200.1 | Wheat | cytosol, plastid | 91.71 | 91.71 |
| HORVU1Hr1G033390.2 | Barley | cytosol | 91.24 | 91.24 |
| KXG37238 | Sorghum | cytosol | 75.12 | 75.81 |
| EER89913 | Sorghum | cytosol | 64.98 | 64.98 |
| EES19812 | Sorghum | cytosol | 64.52 | 63.64 |
| EES19950 | Sorghum | cytosol | 62.67 | 62.96 |
| OQU89311 | Sorghum | cytosol | 61.75 | 62.04 |
| OQU77196 | Sorghum | cytosol | 62.67 | 61.82 |
| EER98344 | Sorghum | cytosol | 63.13 | 61.44 |
| OQU91938 | Sorghum | cytosol | 60.37 | 60.37 |
| OQU87300 | Sorghum | cytosol | 59.45 | 58.9 |
| EER90540 | Sorghum | cytosol | 64.06 | 58.9 |
| EER92725 | Sorghum | cytosol | 57.14 | 57.14 |
| EER96479 | Sorghum | cytosol | 57.14 | 54.87 |
| EER90389 | Sorghum | cytosol | 44.24 | 45.93 |
| EER97073 | Sorghum | cytosol | 51.15 | 43.36 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | EntrezGene:8066662 | UniProt:C5YVB1 | EnsemblPlants:EES17935 | ProteinID:EES17935 |
| ProteinID:EES17935.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | InterPro:P-loop_NTPase | PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 |
| PANTHER:PTHR24073 | PANTHER:PTHR24073:SF600 | SMART:SM00173 | SMART:SM00174 | SMART:SM00175 | SMART:SM00176 |
| EnsemblPlantsGene:SORBI_3009G089700 | SUPFAM:SSF52540 | unigene:Sbi.6571 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase | TIGRFAMs:TIGR00231 |
| UniParc:UPI0001A88ABE | RefSeq:XP_002439505.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:16274115..16278808
Molecular Weight (calculated)
23927.5 Da
IEP (calculated)
8.212
GRAVY (calculated)
-0.201
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGRVDHEYS YLFKMVLIGD SGVGKSNILS RFTRNHFSLD SKSTIGVEFA TKSLQMDGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQSF
101: ENVHRWLREL RDHADSSIVI MMVGNKSDLI HLRAISEDEG KALAEKEGLF FLETSAMEAI NVEEAFQTII TEVYGIVNRK ALAAKEAAAT TATLPSQGKT
201: ISIDSTAGNT KRACCST
101: ENVHRWLREL RDHADSSIVI MMVGNKSDLI HLRAISEDEG KALAEKEGLF FLETSAMEAI NVEEAFQTII TEVYGIVNRK ALAAKEAAAT TATLPSQGKT
201: ISIDSTAGNT KRACCST
001: MTHRVDQEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTTQVEGKT IKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS
101: DNVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVAEEDG QSLAEKEGLS FLETSALEAT NVEKAFQTIL GEIYHIISKK ALAAQEAAAA NSAIPGQGTT
201: INVDDTSGGA KRACCSS
Arabidopsis Description
RABA2CRas-related protein RABA2c [Source:UniProtKB/Swiss-Prot;Acc:Q96283]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.