Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G368300.1 | Wheat | cytosol | 87.04 | 99.08 |
| TraesCS7A01G354400.1 | Wheat | golgi | 87.04 | 99.08 |
| TraesCS7B01G273300.1 | Wheat | plastid | 86.23 | 98.16 |
| EER89913 | Sorghum | cytosol | 84.62 | 96.31 |
| Zm00001d046313_P001 | Maize | plastid | 83.81 | 95.39 |
| Os06t0551400-01 | Rice | cytosol, golgi, plasma membrane, plastid | 83.0 | 94.47 |
| HORVU5Hr1G056470.1 | Barley | cytosol, plasma membrane | 70.85 | 81.02 |
| Zm00001d037004_P002 | Maize | cytosol | 84.62 | 72.82 |
| HORVU5Hr1G114250.1 | Barley | cytosol, plasma membrane | 59.11 | 67.91 |
| HORVU1Hr1G001920.2 | Barley | cytosol | 58.7 | 64.44 |
| HORVU3Hr1G071740.1 | Barley | plastid | 72.47 | 62.59 |
| HORVU1Hr1G033390.2 | Barley | cytosol | 54.25 | 61.75 |
| HORVU5Hr1G080990.3 | Barley | cytosol, plasma membrane, vacuole | 44.94 | 50.23 |
| HORVU7Hr1G091490.3 | Barley | cytosol | 44.94 | 48.68 |
| HORVU5Hr1G120210.4 | Barley | plastid | 61.94 | 48.42 |
| HORVU3Hr1G085710.1 | Barley | cytosol, plastid | 59.11 | 46.5 |
| HORVU1Hr1G034400.4 | Barley | plasma membrane | 50.2 | 45.42 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | EnsemblPlantsGene:HORVU7Hr1G089120 | EnsemblPlants:HORVU7Hr1G089120.1 | InterPro:P-loop_NTPase |
| PFAM:PF00071 | PRINTS:PR00449 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF544 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Small_GTP-bd_dom | InterPro:Small_GTPase |
| TIGRFAMs:TIGR00231 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:+:540689692..540693012
Molecular Weight (calculated)
26942.7 Da
IEP (calculated)
6.047
GRAVY (calculated)
-0.311
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: XLLHHLPPPP PSLSSSFAAP QTQIADATRA MAAGYRAEDD YDYLFKVVLI GDSGVGKSNL LSRFTRNEFS LESKSTIGVE FATRSLQVDG KVVKAQIWDT
101: AGQERYRAIT SAYYRGAVGA LLVYDVTRHA TFENAERWLK ELRDHTDPNI VVMLVGNKSD LRHLVAVPTD EGKAFAERES LYFMETSALE STNVEDAFAE
201: VLKQIYRIVS KRAVDAGEDS ASGPGKGEKI NMKDDVSAVK KGGCCSS
101: AGQERYRAIT SAYYRGAVGA LLVYDVTRHA TFENAERWLK ELRDHTDPNI VVMLVGNKSD LRHLVAVPTD EGKAFAERES LYFMETSALE STNVEDAFAE
201: VLKQIYRIVS KRAVDAGEDS ASGPGKGEKI NMKDDVSAVK KGGCCSS
001: MAGYRADDDY DYLFKVVLIG DSGVGKSNLL SRFTRNEFSL ESKSTIGVEF ATRSLNVNEK VIKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDVTRHST
101: FENVERWLRE LRDHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAENESL YFMETSALES TNVENAFSEV LTQIYHVVSK KAMEAGEDSG NVPSKGEKID
201: VDVSAVKKTG CCSN
101: FENVERWLRE LRDHTDPNIV VMLVGNKSDL RHLVAVQTED AKSFAENESL YFMETSALES TNVENAFSEV LTQIYHVVSK KAMEAGEDSG NVPSKGEKID
201: VDVSAVKKTG CCSN
Arabidopsis Description
RABA1DRABA1d [Source:UniProtKB/TrEMBL;Acc:A0A178V3A0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.