Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 1
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055848 | Potato | cytosol | 98.14 | 98.6 |
| Solyc05g052900.2.1 | Tomato | cytosol | 90.7 | 90.7 |
| KRH15036 | Soybean | cytosol, nucleus | 86.51 | 86.11 |
| KRG97821 | Soybean | cytosol, endoplasmic reticulum, nucleus | 85.58 | 84.79 |
| KRH73103 | Soybean | cytosol, endoplasmic reticulum, nucleus | 85.58 | 84.79 |
| Solyc06g076450.2.1 | Tomato | plastid | 84.19 | 84.19 |
| HORVU5Hr1G114250.1 | Barley | cytosol, plasma membrane | 84.19 | 84.19 |
| Solyc06g005810.2.1 | Tomato | cytosol, unclear | 84.19 | 83.8 |
| Zm00001d034675_P002 | Maize | cytosol | 83.26 | 83.26 |
| Os03t0823700-01 | Rice | plasma membrane | 83.26 | 83.26 |
| GSMUA_Achr6P14930_001 | Banana | cytosol | 66.05 | 83.04 |
| KXG37238 | Sorghum | cytosol | 82.79 | 82.79 |
| TraesCS5D01G498600.1 | Wheat | cytosol | 81.86 | 81.86 |
| TraesCS5B01G498600.1 | Wheat | cytosol, plastid | 81.86 | 81.86 |
| TraesCS5A01G485100.1 | Wheat | cytosol, golgi | 81.86 | 81.86 |
| GSMUA_Achr7P26890_001 | Banana | cytosol | 70.23 | 80.75 |
| GSMUA_Achr9P03770_001 | Banana | cytosol | 69.77 | 80.21 |
| VIT_13s0019g02470.t01 | Wine grape | cytosol | 89.3 | 79.67 |
| GSMUA_Achr8P02230_001 | Banana | plasma membrane | 80.0 | 79.63 |
| GSMUA_Achr5P28770_001 | Banana | cytosol | 78.14 | 77.42 |
| Solyc01g103380.2.1 | Tomato | nucleus | 72.09 | 72.43 |
| Solyc10g045550.1.1 | Tomato | nucleus | 70.7 | 70.7 |
| Solyc07g053480.2.1 | Tomato | cytosol, plastid | 66.98 | 66.36 |
| Solyc07g055290.2.1 | Tomato | plastid | 66.05 | 65.14 |
| Solyc12g010790.1.1 | Tomato | cytosol, nucleus, unclear | 65.58 | 64.98 |
| Solyc03g006270.2.1 | Tomato | cytosol | 65.12 | 64.81 |
| Solyc10g008840.2.1 | Tomato | cytosol | 64.19 | 64.19 |
| Solyc12g014080.1.1 | Tomato | cytosol | 64.65 | 64.06 |
| Solyc02g072180.2.1 | Tomato | cytosol | 64.19 | 63.59 |
| Solyc11g010100.1.1 | Tomato | cytosol | 63.26 | 60.71 |
| Solyc04g012180.2.1 | Tomato | cytosol, unclear | 62.33 | 60.36 |
| Solyc10g079030.1.1 | Tomato | plastid | 62.79 | 59.73 |
| Solyc03g064020.2.1 | Tomato | cytosol | 61.4 | 58.93 |
| Solyc01g086850.2.1 | Tomato | cytosol | 60.93 | 58.22 |
| Solyc01g096220.2.1 | Tomato | plastid | 58.14 | 51.44 |
Protein Annotations
| MapMan:22.8.1.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0003924 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | UniProt:K4BHW7 | InterPro:P-loop_NTPase | PFAM:PF00071 |
| PRINTS:PR00449 | ScanProsite:PS00675 | PFscan:PS51419 | PANTHER:PTHR24073 | PANTHER:PTHR24073:SF495 | SMART:SM00173 |
| SMART:SM00174 | SMART:SM00175 | SMART:SM00176 | SUPFAM:SSF52540 | InterPro:Sigma_54_int_dom_ATP-bd_1 | InterPro:Small_GTP-bd_dom |
| InterPro:Small_GTPase | EnsemblPlantsGene:Solyc03g079900.2 | EnsemblPlants:Solyc03g079900.2.1 | TIGRFAMs:TIGR00231 | UniParc:UPI0002768196 | : |
Description
No Description!
Coordinates
chr3:+:51787671..51789397
Molecular Weight (calculated)
23964.6 Da
IEP (calculated)
7.552
GRAVY (calculated)
-0.264
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAYKVDHEY DYLFKIVLIG DSGVGKSNIL SRFTRNEFCL ESKSTIGVEF ATRTLQVEGK TVKAQIWDTA GQERYRAITS AYYRGAVGAL LVYDITKRQT
101: FENVHRWLRE LRDHADSNIV IMMAGNKSDL NHLRAIPDHD ARLLAEKEGL SFLETSALEA LNVEKAFQTI LLDIYQIISR KALAAQEAGA TPGQGTVIKV
201: GDNSGNSNTR PCCSN
101: FENVHRWLRE LRDHADSNIV IMMAGNKSDL NHLRAIPDHD ARLLAEKEGL SFLETSALEA LNVEKAFQTI LLDIYQIISR KALAAQEAGA TPGQGTVIKV
201: GDNSGNSNTR PCCSN
001: MANRIDHEYD YLFKIVLIGD SGVGKSNILS RFTRNEFCLE SKSTIGVEFA TRTLQVEGKT VKAQIWDTAG QERYRAITSA YYRGAVGALL VYDITKRQTF
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST
101: ENVLRWLREL RDHADSNIVI MMAGNKSDLN HLRSVADEDG RSLAEKEGLS FLETSALEAT NIEKAFQTIL SEIYHIISKK ALAAQEAAGN LPGQGTAINI
201: SDSSATNRKG CCST
Arabidopsis Description
RABA2BRABA2b [Source:UniProtKB/TrEMBL;Acc:A0A178WHD5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.