Factsheet for Os01t0827400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, extracellular

Predictor Summary:

plastid 1
extracellular 3
mitochondrion 2
plasma membrane 3
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	extracellular
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0226300-01
Os01t0736900-01
Os01t0827400-01
Os01t0951800-01
Os02t0265900-01
Os03t0356484-01
Os03t0819900-01
Os05t0383000-01
Os05t0461300-01
Os05t0474400-01
Os05t0526400-01
Os06t0107000-01
Os06t0503400-01
Os07t0239400-01
Os11t0107600-01
Os12t0107600-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38360.1	Os03t0819900-01	AT3G46060.1	21798944
AT2G38360.1	Os05t0461300-01	AT3G46060.1	21798944
AT2G38360.1	Os07t0239400-01	AT3G46060.1	21798944
AT5G01640.1	Os06t0107000-01	AT4G25660.1	21798944
AT5G01640.1	Os01t0827400-01	AT5G01640.1	21798944
AT5G01640.1	Os05t0474400-01	AT5G01640.1	21798944
AT5G01640.1	Os11t0107600-01	AT5G01640.1	21798944
AT5G01640.1	Os12t0107600-00	AT5G01640.1	21798944
AT5G01640.1	Os01t0951800-01	AT5G12390.1	21798944
AT5G01640.1	Os03t0356484-01	AT5G12390.1	21798944
AT5G01640.1	Os05t0383000-01	AT5G12390.1	21798944
AT5G01640.1	Os01t0226300-01	AT5G41600.1	21798944
AT5G01640.1	Os01t0736900-01	AT5G41600.1	21798944
AT5G01640.1	Os02t0265900-01	AT5G41600.1	21798944
AT5G01640.1	Os05t0526400-01	AT5G41600.1	21798944
AT5G01640.1	Os06t0503400-01	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G086930.1	Barley	cytosol, plastid	51.03	66.07
TraesCS3B01G380000.1	Wheat	plastid	88.28	60.09
TraesCS3A01G348100.1	Wheat	plastid	86.9	59.43
Zm00001d043018_P001	Maize	mitochondrion	88.97	58.64
TraesCS3D01G341700.1	Wheat	plastid	88.28	57.92
EES03822	Sorghum	plastid	88.97	57.85
HORVU3Hr1G088130.1	Barley	plastid	86.9	57.27
Os05t0474400-01	Rice	plasma membrane, vacuole	80.69	53.18
GSMUA_Achr3P10010_001	Banana	plastid	61.38	41.2
AT4G00005.1	Thale cress	extracellular, plasma membrane	33.1	40.68
Os11t0107600-01	Rice	plastid	60.69	40.0
GSMUA_Achr5P07440_001	Banana	plastid	59.31	40.0
Os12t0107600-00	Rice	plastid	60.69	40.0
Bra005112.1-P	Field mustard	plastid	44.14	38.1
OQU79263	Sorghum	plastid	42.07	36.97
KRH76033	Soybean	endoplasmic reticulum	52.41	34.7
CDY54457	Canola	endoplasmic reticulum, peroxisome, plasma membrane	43.45	34.62
CDX80758	Canola	plastid	51.03	34.58
PGSC0003DMT400034320	Potato	plastid	49.66	33.96
KRH65569	Soybean	plastid	52.41	33.48
KRG93818	Soybean	extracellular, plasma membrane, vacuole	19.31	33.33
AT5G01640.1	Thale cress	plastid	48.97	31.84
Solyc10g076360.1.1	Tomato	plastid	48.97	31.7
CDY63156	Canola	plastid	47.59	31.65
PGSC0003DMT400041063	Potato	plastid	48.97	31.14
AT2G38360.1	Thale cress	plastid	46.21	30.45
KRH00333	Soybean	plastid	47.59	30.4
Bra000056.1-P	Field mustard	plastid	46.21	30.18
CDY07736	Canola	plastid	46.21	30.18
KRH49465	Soybean	plastid	46.21	30.04
KRH32827	Soybean	plastid	43.45	27.88
Os05t0200280-01	Rice	plasma membrane	32.41	24.35
Os01t0196500-01	Rice	plastid	31.72	22.89
CDY61529	Canola	plastid	19.31	22.22
Os03t0798400-01	Rice	plasma membrane	31.72	20.0
Os03t0741600-00	Rice	nucleus	37.24	15.88

Protein Annotations

EnsemblPlants:Os01t0827400-01	EnsemblPlantsGene:Os01g0827400	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Prenylated_rab_accept_PRA1
PANTHER:PTHR19317	PANTHER:PTHR19317:SF12	PFAM:PF03208	ProteinID:BAF06594.1	ProteinID:BAS75027.1	SEG:seg
TMHMM:TMhelix	UniParc:UPI0000DD8DC5	UniProt:Q0JI34	MapMan:22.8.4.3.2	:	:

Description

Prenylated rab acceptor PRA1 family protein. (Os01t0827400-01)

Coordinates

chr1:-:35407605..35408396

Molecular Weight (calculated)

15322.8 Da

IEP (calculated)

8.502

GRAVY (calculated)

0.885

Length

145 amino acids

Sequence
(BLAST)

001: LSEATSRLRR NLAYFRVNYA AVVAFSLAAS LLAHPFSLLV LLAILGGWCF LYVFRAADQP VVLFGRTFTD RETLLGLVVA SVLAFFMTSV ASLIISGLLV
101: GGAIVAVHGA FRVPEDLFLD DPSVGSNGNT TSRLLSFLGA PGSGV

Best Arabidopsis Sequence Match ( AT2G40380.1 )
(BLAST)

001: MSSSPAILPV TNQQAATQSQ PPINSHAFRT FLSRLSSSLR ESLSQRRPWL ELVDRSSFAR PDSLTDSFSR IRKNLAYFKV NYSAIVSLVL AFSLLSHPFS
101: LLVLLSLLGS WMFLYLFRSS DQPLVLFGRS FSDRETLLGL VLTTIVVVFM TSVGSLLTSA LTIGIAIVCL HGAFRVPDDL FLDEQEPANA GLLSFIGNSA
201: ATSAAASVVA GRV

Arabidopsis Description

PRA1B2PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VRS5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.