Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G385000.1 | Wheat | extracellular, plasma membrane | 35.88 | 85.31 |
| TraesCS5A01G381200.1 | Wheat | plastid | 59.41 | 78.91 |
| HORVU0Hr1G013770.1 | Barley | mitochondrion | 67.06 | 71.03 |
| Zm00001d013306_P001 | Maize | plastid | 56.47 | 70.33 |
| Zm00001d033966_P001 | Maize | plastid | 60.0 | 69.86 |
| EER93477 | Sorghum | plastid | 60.29 | 69.73 |
| GSMUA_AchrUn_... | Banana | plastid | 35.59 | 51.49 |
| Os01t0196500-01 | Rice | plastid | 22.06 | 37.31 |
| Os05t0200280-01 | Rice | plasma membrane | 21.18 | 37.31 |
| Os01t0827400-01 | Rice | extracellular, mitochondrion, plasma membrane | 15.88 | 37.24 |
| Os03t0798400-01 | Rice | plasma membrane | 24.41 | 36.09 |
| Os11t0107600-01 | Rice | plastid | 22.65 | 35.0 |
| Os05t0474400-01 | Rice | plasma membrane, vacuole | 22.06 | 34.09 |
| Os12t0107600-00 | Rice | plastid | 22.06 | 34.09 |
Protein Annotations
| EnsemblPlants:Os03t0741600-00 | EnsemblPlantsGene:Os03g0741600 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Prenylated_rab_accept_PRA1 |
| PANTHER:PTHR19317 | PANTHER:PTHR19317:SF16 | PFAM:PF03208 | ProteinID:BAS86312.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000393AB51 | UniProt:A0A0P0W2T6 | MapMan:22.8.4.3.2 | : | : | : |
Description
Prenylated rab acceptor PRA1 family protein. (Os03t0741600-00)
Coordinates
chr3:+:30436490..30437889
Molecular Weight (calculated)
35845.0 Da
IEP (calculated)
10.214
GRAVY (calculated)
-0.035
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKDEPDRRC FADKQTPSLK TRDSTTPRRP FPPQSQRSKR KLKAKAQRES SEIHHNFPQS DPLSLSPLAD LAAATMRNST SSAAAQPAPA SAAMYGSYAS
101: PSSGAGGYAK IPTYPPPPSA YPAAPPPPVM GQPVPPPPAQ LHDPTAPPSP IAKAAELVTR FREQGQALIA ARRPWGEVFR APAFSRPPSV GEAVARARRN
201: AAYFRANYAL AVLAVVAASL LWHPGTLFAL LALCAAWFFL YFARPASSAG QPLRLLGMEF EDGTVLAALT GVTVIALLFT NVGWNVIGSV MIGAALVAAH
301: ATLRSTDDLF LTEQEAAGDG LVAAGMSAAG PILPTYVRIA
101: PSSGAGGYAK IPTYPPPPSA YPAAPPPPVM GQPVPPPPAQ LHDPTAPPSP IAKAAELVTR FREQGQALIA ARRPWGEVFR APAFSRPPSV GEAVARARRN
201: AAYFRANYAL AVLAVVAASL LWHPGTLFAL LALCAAWFFL YFARPASSAG QPLRLLGMEF EDGTVLAALT GVTVIALLFT NVGWNVIGSV MIGAALVAAH
301: ATLRSTDDLF LTEQEAAGDG LVAAGMSAAG PILPTYVRIA
001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
Arabidopsis Description
PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.