Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
- plasma membrane 2
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90731 | Sorghum | plastid | 77.39 | 79.46 |
| TraesCS5A01G443300.1 | Wheat | plastid | 78.26 | 77.25 |
| Zm00001d013069_P001 | Maize | plastid | 75.65 | 76.99 |
| TraesCS5D01G450800.1 | Wheat | plastid | 77.39 | 76.39 |
| TraesCS5B01G447900.1 | Wheat | plastid | 76.52 | 75.86 |
| Zm00001d034469_P001 | Maize | plastid | 73.91 | 74.89 |
| HORVU5Hr1G106520.1 | Barley | cytosol | 61.3 | 60.26 |
| GSMUA_Achr7P07600_001 | Banana | plastid | 40.87 | 45.41 |
| Bra018602.1-P | Field mustard | plastid | 38.7 | 42.79 |
| CDX93539 | Canola | plastid | 38.26 | 42.31 |
| CDX95035 | Canola | plastid | 37.83 | 41.83 |
| KRG92690 | Soybean | plastid | 33.48 | 40.1 |
| KRH34097 | Soybean | plastid | 33.04 | 40.0 |
| Os05t0200280-01 | Rice | plasma membrane | 32.61 | 38.86 |
| VIT_14s0081g00090.t01 | Wine grape | plastid | 33.48 | 37.38 |
| PGSC0003DMT400050026 | Potato | plastid | 34.78 | 37.21 |
| AT1G08770.1 | Thale cress | plastid | 33.48 | 36.84 |
| Os11t0107600-01 | Rice | plastid | 33.91 | 35.45 |
| Os01t0196500-01 | Rice | plastid | 30.87 | 35.32 |
| Os12t0107600-00 | Rice | plastid | 31.74 | 33.18 |
| Os01t0827400-01 | Rice | extracellular, mitochondrion, plasma membrane | 20.0 | 31.72 |
| Os05t0474400-01 | Rice | plasma membrane, vacuole | 30.0 | 31.36 |
| Solyc01g097230.2.1 | Tomato | plastid | 20.87 | 29.81 |
| Os03t0741600-00 | Rice | nucleus | 36.09 | 24.41 |
Protein Annotations
| MapMan:22.8.4.3.2 | EntrezGene:4334436 | ProteinID:AAP44668.1 | ProteinID:ABF99363.1 | EMBL:AK109070 | ProteinID:BAF13484.1 |
| ProteinID:BAS86865.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 |
| EnsemblPlantsGene:Os03g0798400 | EnsemblPlants:Os03t0798400-01 | PFAM:PF03208 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF5 | InterPro:Prenylated_rab_accept_PRA1 |
| UniProt:Q7Y1J0 | TMHMM:TMhelix | UniParc:UPI000019C5AC | RefSeq:XP_015628334.1 | SEG:seg | : |
Description
Prenylated rab acceptor PRA1 family protein. (Os03t0798400-01)
Coordinates
chr3:-:33281634..33282656
Molecular Weight (calculated)
23801.6 Da
IEP (calculated)
9.348
GRAVY (calculated)
0.386
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASTASWSR YGTVPPAAAA AAPPLKREEV VVGGDGEAAA AAPSPSPATA AEAGVAFFSR ARAVAGAAAG RPRAWREVLD ATAFSRPESC GEARARARRN
101: LAYFRANYAL AALVLVFLGL VYRPVSMLAF LALFAAWLGL YFGRGDGEPP LACMGREVDD RVVLAALSVA TVLAVALSRA GLNLLVSLVL AAAAIGAHAA
201: FRMNVYLDER DAYDGSSFMG SSYGGYALPR
101: LAYFRANYAL AALVLVFLGL VYRPVSMLAF LALFAAWLGL YFGRGDGEPP LACMGREVDD RVVLAALSVA TVLAVALSRA GLNLLVSLVL AAAAIGAHAA
201: FRMNVYLDER DAYDGSSFMG SSYGGYALPR
001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
Arabidopsis Description
PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.