Factsheet for TraesCS5A01G443300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
cytosol 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G450800.1	Wheat	plastid	98.28	98.28
TraesCS5B01G447900.1	Wheat	plastid	96.57	96.98
EER90731	Sorghum	plastid	76.82	79.91
Os03t0798400-01	Rice	plasma membrane	77.25	78.26
Zm00001d013069_P001	Maize	plastid	74.25	76.55
Zm00001d034469_P001	Maize	plastid	72.1	74.01
HORVU5Hr1G106520.1	Barley	cytosol	70.39	70.09
GSMUA_Achr7P07600_001	Banana	plastid	41.63	46.86
Bra018602.1-P	Field mustard	plastid	37.34	41.83
KRH34097	Soybean	plastid	33.91	41.58
KRG92690	Soybean	plastid	33.91	41.15
CDX95035	Canola	plastid	36.48	40.87
CDX93539	Canola	plastid	36.48	40.87
TraesCS3A01G104300.1	Wheat	plastid	33.48	40.84
TraesCS1A01G124100.1	Wheat	plastid	32.62	39.79
VIT_14s0081g00090.t01	Wine grape	plastid	34.76	39.32
AT1G08770.1	Thale cress	plastid	33.91	37.8
PGSC0003DMT400050026	Potato	plastid	33.91	36.74
TraesCS4A01G180500.1	Wheat	plastid	31.76	32.46
TraesCS5A01G381200.1	Wheat	plastid	35.19	32.03
TraesCS3A01G348100.1	Wheat	plastid	27.9	30.66
TraesCS5A01G151600.1	Wheat	plastid	29.18	30.09
Solyc01g097230.2.1	Tomato	plastid	19.74	28.57
TraesCS1A01G297900.1	Wheat	plastid	26.61	28.05

Protein Annotations

EnsemblPlants:TraesCS5A01G443300.1	EnsemblPlantsGene:TraesCS5A01G443300	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0008150	GO:GO:0016192	InterPro:Prenylated_rab_accept_PRA1
PANTHER:PTHR19317	PANTHER:PTHR19317:SF5	PFAM:PF03208	SEG:seg	TMHMM:TMhelix	MapMan:22.8.4.3.2

Description

No Description!

Coordinates

chr5A:-:623492647..623493674

Molecular Weight (calculated)

24267.0 Da

IEP (calculated)

9.672

GRAVY (calculated)

0.332

Length

233 amino acids

Sequence
(BLAST)

001: MSSSTASWSR YGAVPAPPPP PRPDANGGFE AAPSPSSSPA SPPAATAAEA GVAFFSRAGA SAAAAAAVGR PRAWREVLDH TAFSRPETCG EARARARRNL
101: AYFRANYALA ALVLVFLGLV YRPRSMLAFL ALFVAWLALY FGRGGDAGPL VCLGRDVDDR VVLAVLSAAT VLAVALTRAG LNLLVSLVLA SALIGVHAAF
201: RMNVYLDERD AFDGDAAVSS FMGSTYGYST LPR

Best Arabidopsis Sequence Match ( AT1G08770.1 )
(BLAST)

001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI

Arabidopsis Description

PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.