Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G443300.1 | Wheat | plastid | 98.28 | 98.28 |
| TraesCS5B01G447900.1 | Wheat | plastid | 97.0 | 97.41 |
| EER90731 | Sorghum | plastid | 75.11 | 78.12 |
| Os03t0798400-01 | Rice | plasma membrane | 76.39 | 77.39 |
| Zm00001d013069_P001 | Maize | plastid | 74.68 | 76.99 |
| Zm00001d034469_P001 | Maize | plastid | 70.39 | 72.25 |
| HORVU5Hr1G106520.1 | Barley | cytosol | 70.39 | 70.09 |
| GSMUA_Achr7P07600_001 | Banana | plastid | 40.77 | 45.89 |
| TraesCS3D01G106500.1 | Wheat | plastid | 33.91 | 41.58 |
| Bra018602.1-P | Field mustard | plastid | 36.91 | 41.35 |
| KRH34097 | Soybean | plastid | 33.48 | 41.05 |
| KRG92690 | Soybean | plastid | 33.48 | 40.62 |
| CDX95035 | Canola | plastid | 36.05 | 40.38 |
| CDX93539 | Canola | plastid | 36.05 | 40.38 |
| TraesCS1D01G130300.1 | Wheat | plastid | 33.05 | 40.31 |
| VIT_14s0081g00090.t01 | Wine grape | plastid | 34.33 | 38.84 |
| AT1G08770.1 | Thale cress | plastid | 33.48 | 37.32 |
| PGSC0003DMT400050026 | Potato | plastid | 33.48 | 36.28 |
| TraesCS4D01G132000.1 | Wheat | plastid | 31.76 | 32.6 |
| TraesCS5D01G156800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 28.76 | 29.65 |
| TraesCS3D01G341700.1 | Wheat | plastid | 27.47 | 28.96 |
| TraesCS1D01G293300.1 | Wheat | plastid | 27.04 | 28.51 |
| Solyc01g097230.2.1 | Tomato | plastid | 19.31 | 27.95 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G450800.1 | EnsemblPlantsGene:TraesCS5D01G450800 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016192 | InterPro:Prenylated_rab_accept_PRA1 |
| PANTHER:PTHR19317 | PANTHER:PTHR19317:SF5 | PFAM:PF03208 | SEG:seg | TMHMM:TMhelix | MapMan:22.8.4.3.2 |
Description
No Description!
Coordinates
chr5D:-:499226137..499226838
Molecular Weight (calculated)
24301.0 Da
IEP (calculated)
9.394
GRAVY (calculated)
0.334
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSTASWSR YGAVPAPPPP PRPDANGDFE AAPSSSSSPA SPPAATAAEA GVAFFSRAGA SAAAAAAVGR PRAWREVLDH TAFSRPETCG EARARARRNL
101: AYFRANYALA ALVLVFLGLV YRPRSMLAFL ALFVAWLALY FGRGGDAGPL VCLGRDVDDR VVLAVLSAAT VLAVALTRAG LNLLVSLVLA SALIGVHAAF
201: RMNVYLDERD AFDADAAVSS FMGSTYGYST LPK
101: AYFRANYALA ALVLVFLGLV YRPRSMLAFL ALFVAWLALY FGRGGDAGPL VCLGRDVDDR VVLAVLSAAT VLAVALTRAG LNLLVSLVLA SALIGVHAAF
201: RMNVYLDERD AFDADAAVSS FMGSTYGYST LPK
001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
Arabidopsis Description
PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.