Factsheet for Solyc01g097230.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 3
extracellular 2
nucleus 1
mitochondrion 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	extracellular, mitochondrion, nucleus, plasma membrane, plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050026	Potato	plastid	93.79	70.23
VIT_14s0081g00090.t01	Wine grape	plastid	45.34	35.44
KRG92690	Soybean	plastid	37.27	31.25
KRH34097	Soybean	plastid	36.02	30.53
AT1G08770.1	Thale cress	plastid	38.51	29.67
GSMUA_Achr7P07600_001	Banana	plastid	37.89	29.47
Bra018602.1-P	Field mustard	plastid	36.65	28.37
CDX93539	Canola	plastid	36.65	28.37
Solyc09g066000.1.1	Tomato	mitochondrion, plastid	30.43	27.84
CDX95035	Canola	plastid	35.4	27.4
Solyc03g121460.1.1	Tomato	plastid	27.95	24.73
Solyc06g050570.1.1	Tomato	plastid	32.92	24.31
Zm00001d013069_P001	Maize	plastid	31.68	22.57
Solyc09g083320.1.1	Tomato	plasma membrane	22.98	22.02
Solyc10g076360.1.1	Tomato	plastid	29.81	21.43
EER90731	Sorghum	plastid	29.19	20.98
Os03t0798400-01	Rice	plasma membrane	29.81	20.87
Zm00001d034469_P001	Maize	plastid	28.57	20.26
TraesCS5A01G443300.1	Wheat	plastid	28.57	19.74
TraesCS5B01G447900.1	Wheat	plastid	27.95	19.4
TraesCS5D01G450800.1	Wheat	plastid	27.95	19.31
Solyc07g066190.1.1	Tomato	plasma membrane, plastid	20.5	17.1
HORVU5Hr1G106520.1	Barley	cytosol	22.98	15.81

Protein Annotations

MapMan:22.8.4.3.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005794	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016192
UniProt:K4B0B1	PFAM:PF03208	PANTHER:PTHR19317	PANTHER:PTHR19317:SF16	InterPro:Prenylated_rab_accept_PRA1	EnsemblPlantsGene:Solyc01g097230.2
EnsemblPlants:Solyc01g097230.2.1	TMHMM:TMhelix	UniParc:UPI0002768014	SEG:seg	:	:

Description

PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:K4B0B1]

Coordinates

chr1:-:88160917..88162075

Molecular Weight (calculated)

17439.9 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.050

Length

161 amino acids

Sequence
(BLAST)

001: MAISANLSNY GTLPTSTPPA SPQTTPHSAR KPPRPPLPRP PQPQPQPPVR TSTVTRSDPA TRRSCDYPAW FYYFREEAIV ISGTQLDDRL VLVGLGLVTV
101: VALALTHVGL NVLVALIIGF FVLGIHGALR GTEDLFLDEN EAAEGGLLSV VSEEQIRPSY R

Best Arabidopsis Sequence Match ( AT1G08770.1 )
(BLAST)

001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI

Arabidopsis Description

PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.