Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93539 | Canola | plastid | 77.99 | 78.37 |
| CDX95035 | Canola | plastid | 77.51 | 77.88 |
| Bra018602.1-P | Field mustard | plastid | 77.51 | 77.88 |
| VIT_14s0081g00090.t01 | Wine grape | plastid | 48.33 | 49.03 |
| KRH34097 | Soybean | plastid | 44.5 | 48.95 |
| KRG92690 | Soybean | plastid | 43.06 | 46.88 |
| GSMUA_Achr7P07600_001 | Banana | plastid | 42.11 | 42.51 |
| PGSC0003DMT400050026 | Potato | plastid | 42.58 | 41.4 |
| AT1G55190.1 | Thale cress | plasma membrane | 35.89 | 39.68 |
| Solyc01g097230.2.1 | Tomato | plastid | 29.67 | 38.51 |
| AT3G13720.1 | Thale cress | cytosol, plasma membrane, plastid | 34.45 | 38.3 |
| Zm00001d013069_P001 | Maize | plastid | 39.23 | 36.28 |
| AT3G13710.1 | Thale cress | plasma membrane | 32.06 | 35.64 |
| EER90731 | Sorghum | plastid | 37.8 | 35.27 |
| Zm00001d034469_P001 | Maize | plastid | 37.32 | 34.36 |
| TraesCS5A01G443300.1 | Wheat | plastid | 37.8 | 33.91 |
| AT1G04260.1 | Thale cress | plasma membrane | 29.19 | 33.52 |
| Os03t0798400-01 | Rice | plasma membrane | 36.84 | 33.48 |
| TraesCS5D01G450800.1 | Wheat | plastid | 37.32 | 33.48 |
| AT1G17700.1 | Thale cress | plasma membrane | 28.71 | 33.33 |
| TraesCS5B01G447900.1 | Wheat | plastid | 36.84 | 33.19 |
| AT4G29658.2 | Thale cress | plastid | 28.23 | 31.05 |
| AT5G56230.1 | Thale cress | plasma membrane, plastid | 27.27 | 30.65 |
| HORVU5Hr1G106520.1 | Barley | cytosol | 33.97 | 30.34 |
| AT5G07110.1 | Thale cress | plastid | 30.62 | 29.63 |
| AT3G56110.1 | Thale cress | plastid | 28.23 | 28.23 |
| AT2G38360.1 | Thale cress | plastid | 29.67 | 28.18 |
| AT4G00005.1 | Thale cress | extracellular, plasma membrane | 15.79 | 27.97 |
| AT5G01640.1 | Thale cress | plastid | 28.71 | 26.91 |
| AT2G40380.1 | Thale cress | plastid | 27.27 | 26.76 |
| AT1G55640.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 21.05 | 23.53 |
| AT5G05380.2 | Thale cress | plasma membrane | 28.71 | 21.13 |
Protein Annotations
| MapMan:22.8.4.3.2 | EntrezGene:837399 | UniProt:A0A178W4Z3 | ProteinID:AAF99767.1 | ProteinID:AEE28345.1 | EMBL:AJ249729 |
| EMBL:AK227363 | ArrayExpress:AT1G08770 | EnsemblPlantsGene:AT1G08770 | RefSeq:AT1G08770 | TAIR:AT1G08770 | RefSeq:AT1G08770-TAIR-G |
| EnsemblPlants:AT1G08770.1 | TAIR:AT1G08770.1 | EMBL:AY088496 | EMBL:BT009715 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0010008 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016192 | RefSeq:NP_563826.1 |
| ProteinID:OAP13236.1 | PFAM:PF03208 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| Symbol:PRA1.E | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF16 | InterPro:Prenylated_rab_accept_PRA1 | UniProt:Q9FRR1 | TMHMM:TMhelix |
| UniParc:UPI00000A9812 | SEG:seg | : | : | : | : |
Description
PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
Coordinates
chr1:+:2808760..2809775
Molecular Weight (calculated)
22416.3 Da
IEP (calculated)
6.969
GRAVY (calculated)
0.361
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.