Factsheet for HORVU5Hr1G106520.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G450800.1	Wheat	plastid	70.09	70.39
TraesCS5A01G443300.1	Wheat	plastid	70.09	70.39
TraesCS5B01G447900.1	Wheat	plastid	68.38	68.97
EER90731	Sorghum	plastid	59.83	62.5
Os03t0798400-01	Rice	plasma membrane	60.26	61.3
Zm00001d013069_P001	Maize	plastid	57.27	59.29
Zm00001d034469_P001	Maize	plastid	55.56	57.27
GSMUA_Achr7P07600_001	Banana	plastid	35.04	39.61
KRG92690	Soybean	plastid	30.77	37.5
KRH34097	Soybean	plastid	30.34	37.37
Bra018602.1-P	Field mustard	plastid	32.91	37.02
CDX93539	Canola	plastid	32.48	36.54
CDX95035	Canola	plastid	32.05	36.06
VIT_14s0081g00090.t01	Wine grape	plastid	29.91	33.98
AT1G08770.1	Thale cress	plastid	30.34	33.97
PGSC0003DMT400050026	Potato	plastid	29.06	31.63
HORVU1Hr1G028520.1	Barley	plastid	26.92	29.17
HORVU4Hr1G024530.1	Barley	plastid	26.5	27.43
HORVU3Hr1G088130.1	Barley	plastid	24.36	25.91
HORVU5Hr1G047520.1	Barley	endoplasmic reticulum, plastid	26.5	25.62
HORVU1Hr1G070360.1	Barley	plastid	23.93	25.23
HORVU3Hr1G018940.2	Barley	plastid	27.35	25.1
Solyc01g097230.2.1	Tomato	plastid	15.81	22.98
HORVU0Hr1G013770.1	Barley	mitochondrion	29.49	21.5
HORVU2Hr1G086930.1	Barley	cytosol, plastid	10.26	21.43

Protein Annotations

EnsemblPlants:HORVU5Hr1G106520.1	EnsemblPlantsGene:HORVU5Hr1G106520	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016192	InterPro:Prenylated_rab_accept_PRA1	ncoils:Coil	PANTHER:PTHR19317	PANTHER:PTHR19317:SF5	PFAM:PF03208
SEG:seg	TMHMM:TMhelix	UniParc:UPI000B4708C7	UniProt:A0A287SMD2	MapMan:22.8.4.3.2	:

Description

PRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A287SMD2]

Coordinates

chrchr5H:+:624361633..624362338

Molecular Weight (calculated)

19247.3 Da

IEP (calculated)

10.172

GRAVY (calculated)

0.291

Length

234 amino acids

Sequence
(BLAST)

001: NPRKQTFSLX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXAAAVG RPRAWREVLD HTAFSRPETC GEARARARRN
101: LAYFRANYAL AALLLVFLGL VYRPRSMLAF LGLFVAWLAF YFGRGGDAGP LACLGRDVDD RVVLAALSAA TVLAVALTRA GLNLLVSLVI ASALIGVHAA
201: FRMNVYLDER DAFDADAAVS SFTGSTYGYS TLPR

Best Arabidopsis Sequence Match ( AT1G08770.1 )
(BLAST)

001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI

Arabidopsis Description

PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.