Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018602.1-P | Field mustard | plastid | 95.19 | 95.19 |
| CDX93539 | Canola | plastid | 95.19 | 95.19 |
| AT1G08770.1 | Thale cress | plastid | 77.88 | 77.51 |
| KRG92690 | Soybean | plastid | 42.79 | 46.35 |
| KRH34097 | Soybean | plastid | 42.31 | 46.32 |
| VIT_14s0081g00090.t01 | Wine grape | plastid | 45.19 | 45.63 |
| CDY51735 | Canola | plasma membrane | 37.5 | 42.86 |
| CDY37483 | Canola | plasma membrane | 37.02 | 42.31 |
| GSMUA_Achr7P07600_001 | Banana | plastid | 41.83 | 42.03 |
| CDY24050 | Canola | cytosol, plasma membrane, plastid | 37.02 | 41.18 |
| CDY33064 | Canola | cytosol, plasma membrane, plastid | 37.02 | 41.18 |
| Zm00001d013069_P001 | Maize | plastid | 43.27 | 39.82 |
| EER90731 | Sorghum | plastid | 42.79 | 39.73 |
| CDY26125 | Canola | cytosol, plasma membrane, plastid | 36.06 | 39.68 |
| PGSC0003DMT400050026 | Potato | plastid | 40.87 | 39.53 |
| CDY23634 | Canola | plasma membrane | 33.17 | 38.12 |
| Os03t0798400-01 | Rice | plasma membrane | 41.83 | 37.83 |
| CDX97509 | Canola | plasma membrane | 32.69 | 37.57 |
| CDY08228 | Canola | plasma membrane | 33.65 | 37.04 |
| Zm00001d034469_P001 | Maize | plastid | 40.38 | 37.0 |
| TraesCS5A01G443300.1 | Wheat | plastid | 40.87 | 36.48 |
| TraesCS5D01G450800.1 | Wheat | plastid | 40.38 | 36.05 |
| TraesCS5B01G447900.1 | Wheat | plastid | 39.9 | 35.78 |
| Solyc01g097230.2.1 | Tomato | plastid | 27.4 | 35.4 |
| CDX81845 | Canola | plasma membrane | 30.77 | 35.36 |
| CDX86646 | Canola | plasma membrane | 29.81 | 34.83 |
| CDY15494 | Canola | plasma membrane | 29.33 | 34.27 |
| CDY26225 | Canola | plasma membrane | 28.85 | 32.61 |
| CDY59501 | Canola | plasma membrane | 28.37 | 32.07 |
| HORVU5Hr1G106520.1 | Barley | cytosol | 36.06 | 32.05 |
| CDY43514 | Canola | mitochondrion | 25.96 | 30.86 |
| CDY32804 | Canola | plastid | 27.88 | 30.85 |
| CDY06788 | Canola | plastid | 28.37 | 30.41 |
| CDX80758 | Canola | plastid | 31.25 | 30.37 |
| CDY63156 | Canola | plastid | 31.25 | 29.82 |
| CDY07736 | Canola | plastid | 31.73 | 29.73 |
| CDY17405 | Canola | plastid | 27.4 | 29.69 |
| CDY61529 | Canola | plastid | 17.79 | 29.37 |
| CDX70153 | Canola | plastid | 29.81 | 28.84 |
| CDY18870 | Canola | plastid | 28.37 | 28.23 |
| CDX72173 | Canola | plastid | 27.4 | 28.08 |
| CDY27245 | Canola | plastid | 27.4 | 28.08 |
| CDY54457 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 24.04 | 27.47 |
| CDY37482 | Canola | plastid | 27.4 | 27.27 |
| CDX74794 | Canola | plastid | 27.88 | 27.23 |
| CDX67633 | Canola | plastid | 27.4 | 27.01 |
| CDY51734 | Canola | plastid | 26.92 | 26.79 |
| CDY31997 | Canola | plastid | 26.92 | 26.67 |
| CDY58876 | Canola | plastid | 27.88 | 26.61 |
| CDX81033 | Canola | plastid | 27.88 | 26.61 |
| CDY51077 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 23.56 | 26.49 |
| CDY55133 | Canola | plasma membrane | 25.96 | 25.35 |
| CDY50022 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 22.6 | 25.27 |
| CDY51733 | Canola | plastid | 25.48 | 24.77 |
| CDY05662 | Canola | plastid | 8.65 | 24.66 |
| CDY41253 | Canola | plastid | 10.1 | 24.42 |
| CDY25186 | Canola | plastid | 10.1 | 24.42 |
Protein Annotations
| EnsemblPlants:CDX95035 | EnsemblPlantsGene:GSBRNA2T00100553001 | GO:A0A078E0C1 | InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF16 |
| PFAM:PF03208 | ProteinID:CDX95035 | ProteinID:CDX95035.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EB07E3 |
| MapMan:22.8.4.3.2 | : | : | : | : | : |
Description
BnaC05g06360D
Coordinates
chrLK031886:-:796875..797501
Molecular Weight (calculated)
22162.8 Da
IEP (calculated)
7.818
GRAVY (calculated)
0.382
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MNQKPPLPPP YGNGGGPSSS SSSSNTTIGT LSARAKQTTQ SVIATLRPWR MLLDLSALAL PHSYNEAMAN LRHNISYFRA NYALAVLGIV FLGLVYHPIS
101: MVAFIVVFIG WILFYFSRDG NDPIVVSGRE VDDRIVLGVL SVVTVLALVY TDVGENVLVS LVVGLLFVGA HAAVRNTGDL FLDEESARQG GIVSAGSVNR
201: GPGSYTPI
101: MVAFIVVFIG WILFYFSRDG NDPIVVSGRE VDDRIVLGVL SVVTVLALVY TDVGENVLVS LVVGLLFVGA HAAVRNTGDL FLDEESARQG GIVSAGSVNR
201: GPGSYTPI
001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
Arabidopsis Description
PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.