CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011125.1-P	Field mustard	mitochondrion	97.71	97.71
CDY06788	Canola	plastid	95.43	86.08
AT4G29658.2	Thale cress	plastid	80.0	73.68
VIT_11s0016g02330.t01	Wine grape	plastid	43.43	40.21
CDY33064	Canola	cytosol, plasma membrane, plastid	37.71	35.29
GSMUA_Achr7P09070_001	Banana	plastid	37.14	34.57
CDY24050	Canola	cytosol, plasma membrane, plastid	36.57	34.22
Zm00001d039455_P002	Maize	extracellular, mitochondrion	37.71	34.2
KRH49060	Soybean	plasma membrane	38.29	33.84
KRH74153	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	38.29	33.5
CDY23634	Canola	plasma membrane	34.29	33.15
EES00126	Sorghum	plastid	35.43	32.29
CDX97509	Canola	plasma membrane	33.14	32.04
CDY51735	Canola	plasma membrane	33.14	31.87
CDY37483	Canola	plasma membrane	33.14	31.87
CDY26125	Canola	cytosol, plasma membrane, plastid	34.29	31.75
Zm00001d037747_P001	Maize	plastid	33.14	30.85
CDY08228	Canola	plasma membrane	33.14	30.69
TraesCS3D01G106500.1	Wheat	plastid	32.57	30.0
TraesCS3B01G122600.1	Wheat	plastid	32.57	30.0
CDX81845	Canola	plasma membrane	30.86	29.83
OQU77594	Sorghum	plastid	33.14	29.59
CDY26225	Canola	plasma membrane	30.86	29.35
CDY59501	Canola	plasma membrane	30.86	29.35
TraesCS3A01G104300.1	Wheat	plastid	32.0	29.32
CDY51077	Canola	cytosol, endoplasmic reticulum, plasma membrane	30.86	29.19
CDY50022	Canola	cytosol, endoplasmic reticulum, plasma membrane	30.86	29.03
CDX86646	Canola	plasma membrane	29.14	28.65
Os05t0200280-01	Rice	plasma membrane	31.43	28.5
TraesCS1D01G130300.1	Wheat	plastid	30.86	28.27
Os01t0196500-01	Rice	plastid	32.0	27.86
TraesCS1A01G124100.1	Wheat	plastid	30.29	27.75
TraesCS1B01G143000.1	Wheat	plastid	30.29	27.6
CDY15494	Canola	plasma membrane	28.0	27.53
CDX70153	Canola	plastid	33.71	27.44
CDY18870	Canola	plastid	32.57	27.27
CDY27245	Canola	plastid	31.43	27.09
CDX72173	Canola	plastid	31.43	27.09
CDX74794	Canola	plastid	32.57	26.76
CDY31997	Canola	plastid	31.43	26.19
CDY05662	Canola	plastid	10.86	26.03
CDX95035	Canola	plastid	30.86	25.96
CDX93539	Canola	plastid	30.86	25.96
CDX67633	Canola	plastid	30.86	25.59
CDY25186	Canola	plastid	12.57	25.58
CDY41253	Canola	plastid	12.57	25.58
CDX80758	Canola	plastid	30.29	24.77
HORVU1Hr1G028520.1	Barley	plastid	30.29	24.54
CDY32804	Canola	plastid	25.71	23.94
HORVU3Hr1G018940.2	Barley	plastid	34.29	23.53
CDY63156	Canola	plastid	29.14	23.39
CDY17405	Canola	plastid	25.14	22.92
CDY07736	Canola	plastid	28.57	22.52
CDY51734	Canola	plastid	26.86	22.49
CDX81033	Canola	plastid	27.43	22.02
CDY58876	Canola	plastid	27.43	22.02
CDY55133	Canola	plasma membrane	26.29	21.6
CDY37482	Canola	plastid	25.71	21.53
CDY61529	Canola	plastid	15.43	21.43
CDY51733	Canola	plastid	25.71	21.03
CDY54457	Canola	endoplasmic reticulum, peroxisome, plasma membrane	20.57	19.78

Protein Annotations

EnsemblPlants:CDY43514	EnsemblPlantsGene:GSBRNA2T00076797001	GO:A0A078I1Q7	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF2	PFAM:PF03208	ProteinID:CDY43514	ProteinID:CDY43514.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDACED	UniProt:A0A078I1Q7	MapMan:22.8.4.3.2	:

Description

BnaA01g07300DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1Q7]

Coordinates

chrLK032560:-:67953..68480

Molecular Weight (calculated)

19257.1 Da

IEP (calculated)

6.510

GRAVY (calculated)

0.926

Length

175 amino acids

Sequence
(BLAST)

001: MLGRAKGLIS LGLSSRRPWL ELVQWSSLSL PTSFTVATER IKTNIMIFRT NYLVIFVVAI FISMLWQPVH LSVFVVLIIA WLYVYSRDNE PLVIFGSVID
101: DSALVLTLLV LTLCIILLTN VTGGILLAVL AGLPVVLVHG MCRNTESLFV LEDDEEKVAT MSVVSSSLSS SSLTK

Best Arabidopsis Sequence Match ( AT4G29658.2 )
(BLAST)

001: MTTYGTIPSQ ENASSSLSLL GRAKELISLG LSSQRPWLEL VQCSAFSLPI SFSVATERIK SNIMIFRTNY IVIFIVSIFI SMLWQPVHLS VFVILIVAWL
101: YVYSRDNEPW VIFGSVIDDS TLVLVLLVLT IGIFLLTDVS RGIVIGVLAG LPVVLVHGMC RRNTEMLFVL EDDEEKVAMN TSSSSLSSSS

Arabidopsis Description

PRA1.CPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8B7W4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.