Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009110.1-P | Field mustard | plastid | 99.07 | 99.07 |
| CDX67633 | Canola | plastid | 69.3 | 70.62 |
| CDY31997 | Canola | plastid | 68.84 | 70.48 |
| CDX72173 | Canola | plastid | 66.05 | 69.95 |
| CDY27245 | Canola | plastid | 65.58 | 69.46 |
| AT5G05380.2 | Thale cress | plasma membrane | 91.63 | 69.37 |
| Solyc06g050570.1.1 | Tomato | plastid | 70.23 | 69.27 |
| PGSC0003DMT400061546 | Potato | plastid | 70.23 | 69.27 |
| CDX74794 | Canola | plastid | 67.91 | 68.54 |
| CDY18870 | Canola | plastid | 66.05 | 67.94 |
| KRH54835 | Soybean | endoplasmic reticulum, extracellular, vacuole | 32.09 | 63.89 |
| KRH14895 | Soybean | plastid | 63.26 | 63.26 |
| KRH73238 | Soybean | plastid | 62.79 | 62.79 |
| CDY05662 | Canola | plastid | 20.47 | 60.27 |
| CDY41253 | Canola | plastid | 23.26 | 58.14 |
| CDY25186 | Canola | plastid | 23.26 | 58.14 |
| CDY07736 | Canola | plastid | 59.07 | 57.21 |
| CDY63156 | Canola | plastid | 57.67 | 56.88 |
| CDX80758 | Canola | plastid | 51.16 | 51.4 |
| CDX81033 | Canola | plastid | 52.09 | 51.38 |
| CDY58876 | Canola | plastid | 52.09 | 51.38 |
| CDY54457 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 38.14 | 45.05 |
| CDY61529 | Canola | plastid | 23.72 | 40.48 |
| CDY33064 | Canola | cytosol, plasma membrane, plastid | 33.02 | 37.97 |
| CDY51735 | Canola | plasma membrane | 32.09 | 37.91 |
| CDX97509 | Canola | plasma membrane | 31.16 | 37.02 |
| CDY24050 | Canola | cytosol, plasma membrane, plastid | 32.09 | 36.9 |
| CDY37483 | Canola | plasma membrane | 31.16 | 36.81 |
| CDY23634 | Canola | plasma membrane | 30.23 | 35.91 |
| CDY26225 | Canola | plasma membrane | 30.23 | 35.33 |
| CDX81845 | Canola | plasma membrane | 29.3 | 34.81 |
| CDY26125 | Canola | cytosol, plasma membrane, plastid | 29.77 | 33.86 |
| CDY43514 | Canola | mitochondrion | 27.44 | 33.71 |
| CDY59501 | Canola | plasma membrane | 28.84 | 33.7 |
| CDY08228 | Canola | plasma membrane | 28.37 | 32.28 |
| CDY15494 | Canola | plasma membrane | 26.51 | 32.02 |
| CDY06788 | Canola | plastid | 28.84 | 31.96 |
| CDX86646 | Canola | plasma membrane | 26.05 | 31.46 |
| CDX93539 | Canola | plastid | 29.3 | 30.29 |
| CDX95035 | Canola | plastid | 28.84 | 29.81 |
| CDY32804 | Canola | plastid | 25.58 | 29.26 |
| CDY50022 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 25.12 | 29.03 |
| CDY51077 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 24.65 | 28.65 |
| CDY17405 | Canola | plastid | 25.58 | 28.65 |
| CDY51734 | Canola | plastid | 26.51 | 27.27 |
| CDY37482 | Canola | plastid | 26.51 | 27.27 |
| CDY55133 | Canola | plasma membrane | 23.72 | 23.94 |
| CDY51733 | Canola | plastid | 23.72 | 23.83 |
Protein Annotations
| EnsemblPlants:CDX70153 | EnsemblPlantsGene:GSBRNA2T00136266001 | GO:A0A078C5A1 | InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF34 |
| PFAM:PF03208 | ProteinID:CDX70153 | ProteinID:CDX70153.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF004B |
| MapMan:22.8.4.3.2 | : | : | : | : | : |
Description
BnaA10g25020DPRA1 family protein B3 [Source:Projected from Arabidopsis thaliana (AT5G05380) UniProtKB/Swiss-Prot;Acc:Q9FLB6]
Coordinates
chrLK031790:-:3340608..3341255
Molecular Weight (calculated)
23242.5 Da
IEP (calculated)
9.230
GRAVY (calculated)
0.564
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPSTLPIS DHSGGSPPQQ PVSTPAFRTF LSRLSASIRQ SLSQRRPWLE LVDRSAISRP DSLADAYSRI RRNIPYFKVN YVTIVSLVLA LSLLSHPLSL
101: LVLLCLFGAW IFLYLFRQSD QPLVVLGRTF SDREMLAVLV ILTIVVVFLT SVGSLLTTAL MIGFGIVCLH GAFRAPEDLF LDEQEPANIG LLSFLSGAAT
201: SAAVAAASAP ASARV
101: LVLLCLFGAW IFLYLFRQSD QPLVVLGRTF SDREMLAVLV ILTIVVVFLT SVGSLLTTAL MIGFGIVCLH GAFRAPEDLF LDEQEPANIG LLSFLSGAAT
201: SAAVAAASAP ASARV
001: MGLFFMNLLK STWTVEMLRC RERSMVRVIT RDHDVNTGNR LLQKKSIHSY GPLIHAPSSH PHAQSCVMMA NPPTLPISDH SGGGSQSQQP VSTPAFRTFL
101: SRLSSSIRQS LSQRRPWLEL VDRSAISRPE SLTDAYSRIR RNLPYFKVNY VTIVSLVLAL SLLSHPFSLL VLLCLFCAWI FLYLFRPSDQ PLVVLGRTFS
201: DRETLGVLVI LTIVVVFLTS VGSLLTSALM IGFGIVCLHG AFRVPEDLFL DDQEPANTGL LSFLSGAATS AAVAAASTPA SGRV
101: SRLSSSIRQS LSQRRPWLEL VDRSAISRPE SLTDAYSRIR RNLPYFKVNY VTIVSLVLAL SLLSHPFSLL VLLCLFCAWI FLYLFRPSDQ PLVVLGRTFS
201: DRETLGVLVI LTIVVVFLTS VGSLLTSALM IGFGIVCLHG AFRVPEDLFL DDQEPANTGL LSFLSGAATS AAVAAASTPA SGRV
Arabidopsis Description
PRA1.B3prenylated RAB acceptor 1.B3 [Source:TAIR;Acc:AT5G05380]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.