CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002833.1-P	Field mustard	plastid	96.28	97.84
CDY17405	Canola	plastid	93.62	91.67
AT5G56230.1	Thale cress	plasma membrane, plastid	73.4	74.19
Solyc07g066190.1.1	Tomato	plasma membrane, plastid	44.15	43.01
PGSC0003DMT400056954	Potato	plasma membrane	42.55	42.78
CDY51077	Canola	cytosol, endoplasmic reticulum, plasma membrane	40.96	41.62
CDY50022	Canola	cytosol, endoplasmic reticulum, plasma membrane	39.89	40.32
CDY05662	Canola	plastid	12.23	31.51
CDY24050	Canola	cytosol, plasma membrane, plastid	30.85	31.02
CDY33064	Canola	cytosol, plasma membrane, plastid	30.32	30.48
CDY23634	Canola	plasma membrane	28.19	29.28
CDY08228	Canola	plasma membrane	29.26	29.1
CDX93539	Canola	plastid	31.91	28.85
CDY26225	Canola	plasma membrane	27.66	28.26
CDX97509	Canola	plasma membrane	27.13	28.18
CDY27245	Canola	plastid	30.32	28.08
CDX72173	Canola	plastid	30.32	28.08
CDY26125	Canola	cytosol, plasma membrane, plastid	28.19	28.04
CDY51735	Canola	plasma membrane	27.13	28.02
CDY25186	Canola	plastid	12.77	27.91
CDX95035	Canola	plastid	30.85	27.88
CDY61529	Canola	plastid	18.62	27.78
CDY18870	Canola	plastid	30.85	27.75
CDY59501	Canola	plasma membrane	27.13	27.72
CDX80758	Canola	plastid	31.38	27.57
CDX67633	Canola	plastid	30.85	27.49
CDY37483	Canola	plasma membrane	26.6	27.47
CDY31997	Canola	plastid	30.32	27.14
CDX81845	Canola	plasma membrane	26.06	27.07
CDY63156	Canola	plastid	31.38	27.06
CDY07736	Canola	plastid	31.91	27.03
CDY15494	Canola	plasma membrane	25.53	26.97
CDX86646	Canola	plasma membrane	25.53	26.97
CDY06788	Canola	plastid	27.66	26.8
CDY41253	Canola	plastid	12.23	26.74
CDX74794	Canola	plastid	29.79	26.29
CDY58876	Canola	plastid	30.32	26.15
CDY43514	Canola	mitochondrion	23.94	25.71
CDX81033	Canola	plastid	29.79	25.69
CDX70153	Canola	plastid	29.26	25.58
CDY54457	Canola	endoplasmic reticulum, peroxisome, plasma membrane	21.81	22.53
CDY37482	Canola	plastid	25.0	22.49
CDY51734	Canola	plastid	23.94	21.53
CDY51733	Canola	plastid	24.47	21.5
CDY55133	Canola	plasma membrane	23.4	20.66

Protein Annotations

EnsemblPlants:CDY32804	EnsemblPlantsGene:GSBRNA2T00052882001	GO:A0A078H5R0	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF11	PFAM:PF03208	ProteinID:CDY32804	ProteinID:CDY32804.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDEF09	UniProt:A0A078H5R0	MapMan:22.8.4.3.2	:

Description

BnaA10g10450DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5R0]

Coordinates

chrLK032299:+:430425..431045

Molecular Weight (calculated)

20510.0 Da

IEP (calculated)

6.231

GRAVY (calculated)

0.706

Length

188 amino acids

Sequence
(BLAST)

001: MAPTITTTYT SIPIPTGDVI SRSIHNLTSA ISRRRPWSEL VFSGAFCFPE RFSSLPLRSR TNLRYFSVNY SLIIGTCAAF ALVTASPVAL VVVGTIIALW
101: LLLHFFREDP LLLWGFQVGD RTVVCFLVLA SVWALWFTSS AVSLAVGVSV GLLLCTVHSL VRNSDELFLE EDDAITGGLI GSSEIYGC

Best Arabidopsis Sequence Match ( AT5G56230.1 )
(BLAST)

001: MTPSPPPITY ISIPLPTNDV VSRSIHNLTT AISSHRPWSE LIFSGDFSLP ESFSSLLLRS KTNFNYFFVN YTIIVSTCAA FALITASPVA LIVVGAIIAL
101: WLIFHFFRED PLILWSFQVG DRTVLLFLVL ASVWAIWFTN SAVNLAVGVS VGLLLCIIHA VFRNSDELFL EEDDAINGGL IGSNLR

Arabidopsis Description

PRA1G2PRA1 family protein G2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH16]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.