Factsheet for Bra002833.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
endoplasmic reticulum 2
plasma membrane 4
extracellular 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32804	Canola	plastid	97.84	96.28
AT5G56230.1	Thale cress	plasma membrane, plastid	75.68	75.27
Solyc07g066190.1.1	Tomato	plasma membrane, plastid	44.86	43.01
PGSC0003DMT400056954	Potato	plasma membrane	43.24	42.78
Bra038009.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	41.62	41.4
Bra037983.1-P	Field mustard	extracellular, plasma membrane	24.32	32.14
Bra014355.1-P	Field mustard	cytosol, plasma membrane, plastid	29.73	29.1
Bra017037.1-P	Field mustard	plastid	13.51	29.07
Bra007216.1-P	Field mustard	plastid	30.81	28.08
Bra007796.1-P	Field mustard	plastid	12.97	27.91
Bra018602.1-P	Field mustard	plastid	31.35	27.88
Bra025954.1-P	Field mustard	plasma membrane	27.57	27.72
Bra003228.1-P	Field mustard	plastid	31.35	27.49
Bra000056.1-P	Field mustard	plastid	32.97	27.48
Bra027406.1-P	Field mustard	plasma membrane	26.49	27.07
Bra030561.1-P	Field mustard	plasma membrane	25.95	26.97
Bra004965.1-P	Field mustard	plastid	30.81	26.76
Bra021504.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	25.95	26.37
Bra011125.1-P	Field mustard	mitochondrion	24.86	26.29
Bra005924.1-P	Field mustard	plastid	30.27	25.69
Bra009110.1-P	Field mustard	plastid	29.73	25.58
Bra031001.1-P	Field mustard	plasma membrane	24.32	24.86
Bra005112.1-P	Field mustard	plastid	20.0	22.02
Bra021503.1-P	Field mustard	plastid	23.78	21.15
Bra021502.1-P	Field mustard	plastid	24.32	21.03

Protein Annotations

EnsemblPlants:Bra002833.1	EnsemblPlants:Bra002833.1-P	EnsemblPlantsGene:Bra002833	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016192	InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF11	PFAM:PF03208	SEG:seg
TMHMM:TMhelix	UniParc:UPI000254485D	UniProt:M4CF51	MapMan:22.8.4.3.2	:	:

Description

AT5G56230 (E=1e-065) PRA1.G2 | PRA1.G2 (PRENYLATED RAB ACCEPTOR 1.G2)

Coordinates

chrA10:-:7248550..7249107

Molecular Weight (calculated)

20297.8 Da

IEP (calculated)

7.959

GRAVY (calculated)

0.646

Length

185 amino acids

Sequence
(BLAST)

001: MAPTITTTYT SIPIPTGDVI SRSIHNLTSA ISRRRPWSEL VFSGAFCFPE RFSSLPLRSR TNLRYFSVNY SLIIGTCAAF ALVTASPVAL VVVGTIIALW
101: LLLHFFREDP LLLWGFQVGD RTVVCFLVLA SVWALWFTSS AVSLAVGVSV GLLLCTVHSL IRNSDELFLE EDDAITGGLI GSNRR

Best Arabidopsis Sequence Match ( AT5G56230.1 )
(BLAST)

001: MTPSPPPITY ISIPLPTNDV VSRSIHNLTT AISSHRPWSE LIFSGDFSLP ESFSSLLLRS KTNFNYFFVN YTIIVSTCAA FALITASPVA LIVVGAIIAL
101: WLIFHFFRED PLILWSFQVG DRTVLLFLVL ASVWAIWFTN SAVNLAVGVS VGLLLCIIHA VFRNSDELFL EEDDAINGGL IGSNLR

Arabidopsis Description

PRA1G2PRA1 family protein G2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH16]
SUBAcon: [plasma membrane,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.