Factsheet for Bra031001.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81845	Canola	plasma membrane	94.48	94.48
Bra025954.1-P	Field mustard	plasma membrane	85.08	83.7
AT1G17700.1	Thale cress	plasma membrane	81.77	82.22
PGSC0003DMT400006409	Potato	plasma membrane	50.28	50.0
Solyc03g121460.1.1	Tomato	plastid	48.07	47.8
KRH47141	Soybean	plasma membrane	46.41	47.19
KRH44167	Soybean	plasma membrane	45.86	47.16
KRH10001	Soybean	mitochondrion	47.51	46.74
VIT_09s0002g02400.t01	Wine grape	plastid	49.17	46.11
Bra037983.1-P	Field mustard	extracellular, plasma membrane	35.36	45.71
KRH23330	Soybean	plastid	46.41	45.65
Bra027406.1-P	Field mustard	plasma membrane	44.2	44.2
GSMUA_Achr7P09070_001	Banana	plastid	45.3	43.62
Bra021504.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	43.09	42.86
Bra014355.1-P	Field mustard	cytosol, plasma membrane, plastid	43.09	41.27
EES00126	Sorghum	plastid	41.99	39.58
Os05t0200280-01	Rice	plasma membrane	41.99	39.38
Zm00001d039455_P002	Maize	extracellular, mitochondrion	41.99	39.38
TraesCS3D01G106500.1	Wheat	plastid	40.33	38.42
TraesCS3B01G122600.1	Wheat	plastid	40.33	38.42
TraesCS1D01G130300.1	Wheat	plastid	40.33	38.22
TraesCS1B01G143000.1	Wheat	plastid	40.33	38.02
TraesCS3A01G104300.1	Wheat	plastid	39.78	37.7
TraesCS1A01G124100.1	Wheat	plastid	39.78	37.7
Os01t0196500-01	Rice	plastid	40.88	36.82
Zm00001d037747_P001	Maize	plastid	35.91	34.57
OQU77594	Sorghum	plastid	37.02	34.18
HORVU1Hr1G028520.1	Barley	plastid	39.23	32.87
Bra030561.1-P	Field mustard	plasma membrane	29.83	30.34
Bra018602.1-P	Field mustard	plastid	34.25	29.81
Bra011125.1-P	Field mustard	mitochondrion	28.73	29.71
HORVU3Hr1G018940.2	Barley	plastid	40.88	29.02
Bra004965.1-P	Field mustard	plastid	33.7	28.64
Bra005112.1-P	Field mustard	plastid	26.52	28.57
Bra003228.1-P	Field mustard	plastid	33.15	28.44
Bra009110.1-P	Field mustard	plastid	33.7	28.37
Bra007216.1-P	Field mustard	plastid	30.94	27.59
Bra038009.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	27.62	26.88
Bra000056.1-P	Field mustard	plastid	32.6	26.58
Bra021502.1-P	Field mustard	plastid	29.83	25.23
Bra021503.1-P	Field mustard	plastid	28.73	25.0
Bra017037.1-P	Field mustard	plastid	11.6	24.42
Bra002833.1-P	Field mustard	plastid	24.86	24.32
Bra007796.1-P	Field mustard	plastid	11.05	23.26
Bra005924.1-P	Field mustard	plastid	26.52	22.02

Protein Annotations

EnsemblPlants:Bra031001.1	EnsemblPlants:Bra031001.1-P	EnsemblPlantsGene:Bra031001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF2	PFAM:PF03208	SEG:seg	TMHMM:TMhelix
UniParc:UPI0002542B49	UniProt:M4EQD0	MapMan:22.8.4.3.2	:	:	:

Description

AT1G17700 (E=3e-059) PRA1.F1 | PRA1.F1 (PRENYLATED RAB ACCEPTOR 1.F1)

Coordinates

chrA09:-:32988359..32988904

Molecular Weight (calculated)

20547.2 Da

IEP (calculated)

9.364

GRAVY (calculated)

0.319

Length

181 amino acids

Sequence
(BLAST)

001: MTTYGTNPTS ANDLAPKLEY ITRANDQQNV RPGLATRRSW KQMLDLHSFN FPRKIATVIT RIKANTVYFQ TNYTIVVLFS VFLSLVWNPL SLLILLAIIG
101: AWLFLYFLRD EPLTVFDREI DHRVVLMAMS VLTLSILFLT DAKLNIAVAI VAGVAVVLSH AAVRKTEDMY QNEDETSRLL P

Best Arabidopsis Sequence Match ( AT1G17700.1 )
(BLAST)

001: MTTYGTNQKS SNDLAPKLEY ITRGINQHKR SGLATRRPWK QMLDLGSFNF PRKLATVITR IRANTVYFQT NYTIVVLFSV FLSLIWNPFS LLVLLALLGA
101: WLFLYFLRDE PLTVFDREID HRIVLIIMSV ITLSILFLTD AKLNIAVAIV AGALAVLSHA AVRKTEDLFQ TDEETSLLNP

Arabidopsis Description

PRA1F1PRA1 family protein F1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ63]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.