Factsheet for Bra030561.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15494	Canola	plasma membrane	100.0	100.0
CDX86646	Canola	plasma membrane	98.31	98.31
AT1G04260.1	Thale cress	plasma membrane	85.96	84.07
KRH34380	Soybean	cytosol, plastid	43.82	46.15
Solyc09g083320.1.1	Tomato	plasma membrane	33.71	35.71
PGSC0003DMT400015659	Potato	plasma membrane	33.15	35.12
Bra037983.1-P	Field mustard	extracellular, plasma membrane	25.84	32.86
Bra025954.1-P	Field mustard	plasma membrane	32.58	31.52
Bra018602.1-P	Field mustard	plastid	35.39	30.29
Bra031001.1-P	Field mustard	plasma membrane	30.34	29.83
Bra021504.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	29.78	29.12
Bra027406.1-P	Field mustard	plasma membrane	29.21	28.73
Bra014355.1-P	Field mustard	cytosol, plasma membrane, plastid	29.78	28.04
Bra011125.1-P	Field mustard	mitochondrion	27.53	28.0
Bra038009.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	28.65	27.42
Bra009110.1-P	Field mustard	plastid	31.46	26.05
Bra002833.1-P	Field mustard	plastid	26.97	25.95
Bra007216.1-P	Field mustard	plastid	29.21	25.62
Bra005924.1-P	Field mustard	plastid	29.21	23.85
Bra000056.1-P	Field mustard	plastid	29.21	23.42
Bra004965.1-P	Field mustard	plastid	27.53	23.0
Bra003228.1-P	Field mustard	plastid	26.97	22.75
Bra017037.1-P	Field mustard	plastid	10.11	20.93
Bra021503.1-P	Field mustard	plastid	24.16	20.67
Bra007796.1-P	Field mustard	plastid	9.55	19.77
Bra021502.1-P	Field mustard	plastid	23.6	19.63
Bra005112.1-P	Field mustard	plastid	17.98	19.05

Protein Annotations

EnsemblPlants:Bra030561.1	EnsemblPlants:Bra030561.1-P	EnsemblPlantsGene:Bra030561	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016192	InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF5	PFAM:PF03208	SEG:seg
TMHMM:TMhelix	UniParc:UPI00025458A8	UniProt:M4EP41	MapMan:22.8.4.3.2	:	:

Description

AT1G04260 (E=4e-062) MPI7, MPIP7, PRA1.D | MPI7 (CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7); protein binding

Coordinates

chrA08:+:21309984..21310520

Molecular Weight (calculated)

18949.0 Da

IEP (calculated)

4.169

GRAVY (calculated)

0.736

Length

178 amino acids

Sequence
(BLAST)

001: MANQVISGIK ETVQSINGAA RPWGDFLDLS AFSFPSSFSD ATTRLTQNLT HFRINYTIIL SLLLALTLIT RPIAILAFVA VGLAWFFLYF AREEALTVFG
101: FTVDDGVVAV LLIGLTIAAL VTTGVWLSAL TTVGFGALVL ILHAALRGTE DLVTDDLESP YGPMLSTAGG DNGDYSGI

Best Arabidopsis Sequence Match ( AT1G04260.1 )
(BLAST)

001: MANQVITGIK ETAQSITGAA RPWGDFLDLS AFSFPSSIAD ATTRVTQNLT HFRINYSIIL SILLGLTLIT RPIAILAFIA VGLAWFFLYF AREEPLTIFG
101: FTIDDGIVAV LLIGLSIGSL VTTGVWLRAL TTVGFGVLVL ILHAALRGTD DLVSDDLESP YGPMLSTSGG GNDGARGDYS GI

Arabidopsis Description

PRA1DPRA1 family protein D [Source:UniProtKB/Swiss-Prot;Acc:P93829]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.