Factsheet for Bra018602.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93539	Canola	plastid	99.04	99.04
CDX95035	Canola	plastid	95.19	95.19
AT1G08770.1	Thale cress	plastid	77.88	77.51
KRG92690	Soybean	plastid	44.71	48.44
KRH34097	Soybean	plastid	44.23	48.42
VIT_14s0081g00090.t01	Wine grape	plastid	46.15	46.6
Bra037983.1-P	Field mustard	extracellular, plasma membrane	30.29	45.0
GSMUA_Achr7P07600_001	Banana	plastid	44.71	44.93
Bra021504.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	36.06	41.21
PGSC0003DMT400050026	Potato	plastid	42.31	40.93
Zm00001d013069_P001	Maize	plastid	44.23	40.71
EER90731	Sorghum	plastid	43.75	40.62
Os03t0798400-01	Rice	plasma membrane	42.79	38.7
Bra027406.1-P	Field mustard	plasma membrane	33.65	38.67
Zm00001d034469_P001	Maize	plastid	41.83	38.33
Bra014355.1-P	Field mustard	cytosol, plasma membrane, plastid	34.13	37.57
TraesCS5A01G443300.1	Wheat	plastid	41.83	37.34
TraesCS5D01G450800.1	Wheat	plastid	41.35	36.91
Solyc01g097230.2.1	Tomato	plastid	28.37	36.65
TraesCS5B01G447900.1	Wheat	plastid	40.87	36.64
Bra030561.1-P	Field mustard	plasma membrane	30.29	35.39
Bra031001.1-P	Field mustard	plasma membrane	29.81	34.25
HORVU5Hr1G106520.1	Barley	cytosol	37.02	32.91
Bra025954.1-P	Field mustard	plasma membrane	28.85	32.61
Bra002833.1-P	Field mustard	plastid	27.88	31.35
Bra011125.1-P	Field mustard	mitochondrion	25.96	30.86
Bra009110.1-P	Field mustard	plastid	31.25	30.23
Bra000056.1-P	Field mustard	plastid	31.25	29.28
Bra007216.1-P	Field mustard	plastid	28.37	29.06
Bra004965.1-P	Field mustard	plastid	28.85	28.17
Bra005112.1-P	Field mustard	plastid	22.6	27.98
Bra003228.1-P	Field mustard	plastid	28.37	27.96
Bra021503.1-P	Field mustard	plastid	26.92	26.92
Bra038009.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	24.04	26.88
Bra017037.1-P	Field mustard	plastid	11.06	26.74
Bra005924.1-P	Field mustard	plastid	27.88	26.61
Bra007796.1-P	Field mustard	plastid	10.58	25.58
Bra021502.1-P	Field mustard	plastid	25.0	24.3

Protein Annotations

EnsemblPlants:Bra018602.1	EnsemblPlants:Bra018602.1-P	EnsemblPlantsGene:Bra018602	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016192	InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF16	PFAM:PF03208
SEG:seg	TMHMM:TMhelix	UniParc:UPI000253E7A7	UniProt:M4DQ11	MapMan:22.8.4.3.2	:

Description

AT1G08770 (E=1e-067) PRA1.E | PRA1.E (PRENYLATED RAB ACCEPTOR 1.E)

Coordinates

chrA06:+:3036921..3037547

Molecular Weight (calculated)

22265.9 Da

IEP (calculated)

7.811

GRAVY (calculated)

0.352

Length

208 amino acids

Sequence
(BLAST)

001: MNQKPPPPPP PYSYGGGPSS SSSSNTTIGT LSARAKQTTQ SVIATLRPWR MLLDLSALSL PHSYNEAMAN LRHNLSYFRA NYALAVLGVV FLGLVYHPIS
101: MVAFIVVFIG WILFYFSRDG NDPIVVSGRE VDDRIVLAVL SVVTVLALVY TDVGENVLVS LIVGLLFVGA HAAVRNTGDL FLDEESARQG GLVSAGSVNR
201: GPGSYTPI

Best Arabidopsis Sequence Match ( AT1G08770.1 )
(BLAST)

001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI

Arabidopsis Description

PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.