Factsheet for GSMUA_Achr7P07600_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
vacuole 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
golgi 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0081g00090.t01	Wine grape	plastid	57.49	57.77
KRH34097	Soybean	plastid	47.83	52.11
KRG92690	Soybean	plastid	48.31	52.08
GSMUA_Achr7P09070_001	Banana	plastid	45.89	50.53
Bra018602.1-P	Field mustard	plastid	44.93	44.71
PGSC0003DMT400050026	Potato	plastid	46.38	44.65
CDX93539	Canola	plastid	44.44	44.23
EER90731	Sorghum	plastid	46.38	42.86
Zm00001d034469_P001	Maize	plastid	46.38	42.29
AT1G08770.1	Thale cress	plastid	42.51	42.11
CDX95035	Canola	plastid	42.03	41.83
TraesCS5A01G443300.1	Wheat	plastid	46.86	41.63
Zm00001d013069_P001	Maize	plastid	45.41	41.59
TraesCS5B01G447900.1	Wheat	plastid	46.38	41.38
GSMUA_AchrUn_...	Banana	plastid	46.86	41.28
Os03t0798400-01	Rice	plasma membrane	45.41	40.87
TraesCS5D01G450800.1	Wheat	plastid	45.89	40.77
GSMUA_Achr3P10010_001	Banana	plastid	40.1	38.43
Solyc01g097230.2.1	Tomato	plastid	29.47	37.89
GSMUA_Achr4P18690_001	Banana	plastid	38.16	35.75
GSMUA_Achr10P...	Banana	plastid	31.4	35.71
GSMUA_Achr5P07440_001	Banana	plastid	36.72	35.35
HORVU5Hr1G106520.1	Barley	cytosol	39.61	35.04
GSMUA_Achr5P14320_001	Banana	plastid	31.4	34.76
GSMUA_Achr7P22310_001	Banana	plastid	31.4	34.57

Protein Annotations

EnsemblPlants:GSMUA_Achr7P07600_001	EnsemblPlants:GSMUA_Achr7T07600_001	EnsemblPlantsGene:GSMUA_Achr7G07600_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016192	InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF16	PFAM:PF03208
SEG:seg	TMHMM:TMhelix	UniParc:UPI000295DF03	UniProt:M0TFK0	MapMan:22.8.4.3.2	:

Description

Putative PRA1 family protein F2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G07600_001]

Coordinates

chr7:+:5681361..5683163

Molecular Weight (calculated)

22925.8 Da

IEP (calculated)

9.476

GRAVY (calculated)

0.496

Length

207 amino acids

Sequence
(BLAST)

001: MSSASRPWPG YGAIPTAPEE AAEPLSPRVP FASGSRAVEM FSRAKERGTA LVATRRPWRE LAAPSAFSSP YGYRDAVARV RRNLAYFRVN YALVALFVLF
101: CSLLWHPVSM IVFLAVFVAW FFLYFFRDEP VVFFGRAVDD RLVLAALSLV TLVALLFTHV GLNVLVSLIT VAVLVGLHAA FRFTDDQFLD EQEVADGGLR
201: SFVGSRA

Best Arabidopsis Sequence Match ( AT1G55190.1 )
(BLAST)

001: MTNYGAIPTS SHPSPAIDLE YISRAKHRIK SGLATRRPWK SMFDFESMTL PHGFFDAISR IKTNLGYFRA NYAIGVLFIL FLSLLYHPTS LIVLSILVVF
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS

Arabidopsis Description

PRA1F2PRA1 family protein F2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C889]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.