Factsheet for Zm00001d034469_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
endoplasmic reticulum 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90731	Sorghum	plastid	86.34	87.5
Zm00001d013069_P001	Maize	plastid	83.26	83.63
Os03t0798400-01	Rice	plasma membrane	74.89	73.91
TraesCS5A01G443300.1	Wheat	plastid	74.01	72.1
TraesCS5D01G450800.1	Wheat	plastid	72.25	70.39
TraesCS5B01G447900.1	Wheat	plastid	70.93	69.4
HORVU5Hr1G106520.1	Barley	cytosol	57.27	55.56
GSMUA_Achr7P07600_001	Banana	plastid	42.29	46.38
KRH34097	Soybean	plastid	35.24	42.11
Bra018602.1-P	Field mustard	plastid	38.33	41.83
KRG92690	Soybean	plastid	35.24	41.67
CDX93539	Canola	plastid	37.89	41.35
Zm00001d037747_P001	Maize	plastid	33.92	40.96
CDX95035	Canola	plastid	37.0	40.38
Zm00001d039455_P002	Maize	extracellular, mitochondrion	33.48	39.38
AT1G08770.1	Thale cress	plastid	34.36	37.32
VIT_14s0081g00090.t01	Wine grape	plastid	33.48	36.89
PGSC0003DMT400050026	Potato	plastid	34.8	36.74
Zm00001d010603_P002	Maize	mitochondrion	29.96	31.34
Zm00001d052322_P001	Maize	plastid	25.99	31.22
Zm00001d043018_P001	Maize	mitochondrion	29.07	30.0
Zm00001d013306_P001	Maize	plastid	35.24	29.3
Solyc01g097230.2.1	Tomato	plastid	20.26	28.57
Zm00001d033966_P001	Maize	plastid	35.24	27.4

Protein Annotations

EMBL:EU956043	EnsemblPlants:Zm00001d034469_P001	EnsemblPlants:Zm00001d034469_T001	EnsemblPlantsGene:Zm00001d034469	EntrezGene:100280819	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:Prenylated_rab_accept_PRA1	PANTHER:PTHR19317	PANTHER:PTHR19317:SF5	PFAM:PF03208
ProteinID:ONM10345.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000182B579	UniProt:B6STH8	MapMan:22.8.4.3.2

Description

PRA1 family protein E

Coordinates

chr1:-:293920218..293920901

Molecular Weight (calculated)

23958.6 Da

IEP (calculated)

9.671

GRAVY (calculated)

0.228

Length

227 amino acids

Sequence
(BLAST)

001: MPSSTASWSR YGAVPTSPPS PPPPPPQLRP EDDAAGGEAA PSPSVSATAA EAGVAFFSRA RAFAGAGRPR AWREVLDPTA FSRPESCGEA RARARRNLAY
101: FRANYALAAL ALVFLGLVYR PVSMLVFLAL FVAWLGLYFG RGDRGPLVCL RREVDDRAVL AALSAATALA VALTRAGINL LVSLAVAAVA VGLHAAFRVN
201: LYVDETDAFD VAGTSFTDSR YGYALPR

Best Arabidopsis Sequence Match ( AT1G08770.1 )
(BLAST)

001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI

Arabidopsis Description

PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.