Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER93477 | Sorghum | plastid | 89.38 | 88.78 |
| TraesCS5B01G385000.1 | Wheat | extracellular, plasma membrane | 43.15 | 88.11 |
| Zm00001d013306_P001 | Maize | plastid | 75.34 | 80.59 |
| TraesCS5A01G381200.1 | Wheat | plastid | 69.52 | 79.3 |
| HORVU0Hr1G013770.1 | Barley | mitochondrion | 70.55 | 64.17 |
| Os03t0741600-00 | Rice | nucleus | 69.86 | 60.0 |
| GSMUA_AchrUn_... | Banana | plastid | 39.73 | 49.36 |
| Zm00001d039455_P002 | Maize | extracellular, mitochondrion | 25.34 | 38.34 |
| Zm00001d010603_P002 | Maize | mitochondrion | 28.08 | 37.79 |
| Zm00001d013069_P001 | Maize | plastid | 28.08 | 36.28 |
| Zm00001d034469_P001 | Maize | plastid | 27.4 | 35.24 |
| Zm00001d037747_P001 | Maize | plastid | 22.6 | 35.11 |
| Zm00001d043018_P001 | Maize | mitochondrion | 26.03 | 34.55 |
| Zm00001d052322_P001 | Maize | plastid | 20.89 | 32.28 |
Protein Annotations
| EMBL:BT042347 | EnsemblPlants:Zm00001d033966_P001 | EnsemblPlants:Zm00001d033966_T001 | EnsemblPlantsGene:Zm00001d033966 | EntrezGene:100284987 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF16 | PFAM:PF03208 |
| ProteinID:ONM09050.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00017B757F | UniProt:B4FZ09 | MapMan:22.8.4.3.2 |
Description
PRA1 family protein G2
Coordinates
chr1:+:279837248..279838126
Molecular Weight (calculated)
30018.2 Da
IEP (calculated)
9.414
GRAVY (calculated)
0.349
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNSAAAQPS SPAATYVSGA AYVAPASSAA MYGSGASYVA PAASAPGGGG YIYPAPASSG GSAGYSKIPT YPAVPSAYPN PSRLPPRVST HAPVEDPTAL
101: PSPLAKAGEL VTRLREQGQV LIAARRPWGE VFRAPAFSKP PSLGEAIARM RRNTAYFRAN YALAVLAVVA ASLLWHPGTL FVLLFLCAAW FFLYFARPAQ
201: GGQPLRVLGM EFDDGSVLAA LCGVTVIAML FTSVGWNVVG SVMIGGALVS AHAALRTTDD LFLTEQEAAG DGLLAAGMSA AGPILPTYVR IG
101: PSPLAKAGEL VTRLREQGQV LIAARRPWGE VFRAPAFSKP PSLGEAIARM RRNTAYFRAN YALAVLAVVA ASLLWHPGTL FVLLFLCAAW FFLYFARPAQ
201: GGQPLRVLGM EFDDGSVLAA LCGVTVIAML FTSVGWNVVG SVMIGGALVS AHAALRTTDD LFLTEQEAAG DGLLAAGMSA AGPILPTYVR IG
001: MASPLLPTST TPDQLPGGDP QLLSSLRVLL SRVLATVRHA SADARPWAEL VDRSAFSRPP SLSEATSRVR KNFSYFRANY ITLVAILLAA SLLTHPFALF
101: LLASLAASWL FLYFFRPADQ PLVIGGRTFS DLETLGILCL STVVVMFMTS VGSLLMSTLA VGIMGVAIHG AFRAPEDLFL EEQEAIGSGL FAFFNNNASN
201: AAAAAIATSA MSRVRV
101: LLASLAASWL FLYFFRPADQ PLVIGGRTFS DLETLGILCL STVVVMFMTS VGSLLMSTLA VGIMGVAIHG AFRAPEDLFL EEQEAIGSGL FAFFNNNASN
201: AAAAAIATSA MSRVRV
Arabidopsis Description
PRA1B6PRA1 family protein B6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYQ4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.