Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G381200.1 | Wheat | plastid | 98.6 | 55.08 |
| EER93477 | Sorghum | plastid | 89.51 | 43.54 |
| HORVU0Hr1G013770.1 | Barley | mitochondrion | 97.2 | 43.3 |
| Zm00001d033966_P001 | Maize | plastid | 88.11 | 43.15 |
| Zm00001d013306_P001 | Maize | plastid | 80.42 | 42.12 |
| Os03t0741600-00 | Rice | nucleus | 85.31 | 35.88 |
| GSMUA_AchrUn_... | Banana | plastid | 55.94 | 34.04 |
| TraesCS1B01G143000.1 | Wheat | plastid | 38.46 | 28.65 |
| TraesCS3B01G122600.1 | Wheat | plastid | 35.66 | 26.84 |
| TraesCS5B01G150200.1 | Wheat | plastid | 41.26 | 26.11 |
| TraesCS4B01G137300.1 | Wheat | plastid | 39.86 | 25.11 |
| TraesCS5B01G447900.1 | Wheat | plastid | 39.16 | 24.14 |
| TraesCS1B01G307400.1 | Wheat | golgi, unclear | 37.06 | 24.09 |
| TraesCS3B01G380000.1 | Wheat | plastid | 34.27 | 23.0 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G385000.1 | EnsemblPlantsGene:TraesCS5B01G385000 | InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF16 | PFAM:PF03208 |
| SEG:seg | TMHMM:TMhelix | MapMan:22.8.4.3.2 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:563605695..563606511
Molecular Weight (calculated)
15079.4 Da
IEP (calculated)
5.604
GRAVY (calculated)
0.823
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRNTAYFRA NYALAVLAVV AASLLWHPGT LFALLALCAA WFFLYFARPA EGAQPLRIFG TEFDDGTVLA LLSGVTVIAM LFTDVGWNVV GSVMIGLALV
101: GAHAALRSTD DLFLTEQEAA GNGLVAAGFS AAGPILPTYV RIG
101: GAHAALRSTD DLFLTEQEAA GNGLVAAGFS AAGPILPTYV RIG
001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
Arabidopsis Description
PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.