Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G385000.1 | Wheat | extracellular, plasma membrane | 43.3 | 97.2 |
| TraesCS5A01G381200.1 | Wheat | plastid | 75.08 | 94.14 |
| EER93477 | Sorghum | plastid | 65.42 | 71.43 |
| Zm00001d033966_P001 | Maize | plastid | 64.17 | 70.55 |
| Zm00001d013306_P001 | Maize | plastid | 58.88 | 69.23 |
| Os03t0741600-00 | Rice | nucleus | 71.03 | 67.06 |
| GSMUA_AchrUn_... | Banana | plastid | 37.07 | 50.64 |
| HORVU1Hr1G028520.1 | Barley | plastid | 24.3 | 36.11 |
| HORVU1Hr1G070360.1 | Barley | plastid | 23.36 | 33.78 |
| HORVU4Hr1G024530.1 | Barley | plastid | 23.36 | 33.19 |
| HORVU3Hr1G088130.1 | Barley | plastid | 21.5 | 31.36 |
| HORVU3Hr1G018940.2 | Barley | plastid | 23.99 | 30.2 |
| HORVU5Hr1G047520.1 | Barley | endoplasmic reticulum, plastid | 22.43 | 29.75 |
| HORVU5Hr1G106520.1 | Barley | cytosol | 21.5 | 29.49 |
| HORVU2Hr1G086930.1 | Barley | cytosol, plastid | 8.1 | 23.21 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G013770.1 | EnsemblPlantsGene:HORVU0Hr1G013770 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Prenylated_rab_accept_PRA1 |
| PANTHER:PTHR19317 | PANTHER:PTHR19317:SF16 | PFAM:PF03208 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B46B8CB |
| UniProt:A0A287E0Y3 | MapMan:22.8.4.3.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchrUn:-:77711966..77713801
Molecular Weight (calculated)
34023.8 Da
IEP (calculated)
10.533
GRAVY (calculated)
-0.011
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: RYFARKQNPQ RRHLPPPQIA GRGRRLLPHQ RSKPHLDSYS SSSSSSPHHF PPNLPQIPPP ATTSLLALAM RNSASAPPAA AMYGSYPAPP ASSAGYAKIP
101: TYPPPPSSYP NPSPVPPAAP APIQDPTAPP SSLAKAAELV TRFREQGQAL IAARRPWAEV FRSPAFSKPP NVGEAGSRMR RNTAYFRANY ALAVLAVVAA
201: SLFWHPGTLF ALLALCAAWF FLYFARPAEG GQPLRIFGTE FDDGTVLALL SGVTVIAMLF TDVGWNVVGS AMIGVALVGA HAALRSTDDL FLTEQEAAGN
301: GLVAAGFSAA GPILPTYVRI G
101: TYPPPPSSYP NPSPVPPAAP APIQDPTAPP SSLAKAAELV TRFREQGQAL IAARRPWAEV FRSPAFSKPP NVGEAGSRMR RNTAYFRANY ALAVLAVVAA
201: SLFWHPGTLF ALLALCAAWF FLYFARPAEG GQPLRIFGTE FDDGTVLALL SGVTVIAMLF TDVGWNVVGS AMIGVALVGA HAALRSTDDL FLTEQEAAGN
301: GLVAAGFSAA GPILPTYVRI G
001: MNQKPPPYGY GGAGGGGVGP SSTSNTTIIG TLSARAKQTT QSMITTLRPW REILDLSALS LPRGYDEAMA HLKHNISYFR GNYALAVLAI VFLGLIYHPM
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
101: SMIAFIVVFI GWILLYFSRD ANDSIVISGK EVDDKIVLVL LSLVTVLALV YTDVGENVLV SLIIGLLIVG AHGAFRNTDD LFLDEESARR GGLVSAGSGN
201: RPPSSYTPI
Arabidopsis Description
PRA1EPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A178W4Z3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.