Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- mitochondrion 2
- cytosol 1
- plasma membrane 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G385000.1 | Wheat | extracellular, plasma membrane | 43.54 | 89.51 |
| Zm00001d033966_P001 | Maize | plastid | 88.78 | 89.38 |
| Zm00001d013306_P001 | Maize | plastid | 77.21 | 83.15 |
| TraesCS5A01G381200.1 | Wheat | plastid | 69.73 | 80.08 |
| HORVU0Hr1G013770.1 | Barley | mitochondrion | 71.43 | 65.42 |
| Os03t0741600-00 | Rice | nucleus | 69.73 | 60.29 |
| GSMUA_AchrUn_... | Banana | plastid | 40.14 | 50.21 |
| EES00126 | Sorghum | plastid | 25.51 | 39.06 |
| KXG22202 | Sorghum | plastid | 27.21 | 36.87 |
| EER90731 | Sorghum | plastid | 26.87 | 35.27 |
| OQU77594 | Sorghum | plastid | 23.47 | 35.2 |
| OQU82692 | Sorghum | plastid | 26.53 | 34.82 |
| EES15518 | Sorghum | plastid | 26.87 | 33.91 |
| EES03822 | Sorghum | plastid | 25.51 | 33.63 |
| KXG38626 | Sorghum | golgi, plasma membrane, plastid | 19.39 | 30.81 |
| OQU79263 | Sorghum | plastid | 14.97 | 26.67 |
Protein Annotations
| EnsemblPlants:EER93477 | EnsemblPlantsGene:SORBI_3001G095300 | EntrezGene:8085962 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF16 | PFAM:PF03208 |
| ProteinID:EER93477 | ProteinID:EER93477.1 | RefSeq:XP_002466479.1 | SEG:seg | TMHMM:TMhelix | unigene:Sbi.5948 |
| UniParc:UPI0001A826F4 | UniProt:C5X192 | MapMan:22.8.4.3.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:7327069..7328804
Molecular Weight (calculated)
30209.3 Da
IEP (calculated)
9.377
GRAVY (calculated)
0.298
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNYAAAQPS PPASSTATYG SSAAYVAPAA MYGSGAAYVA PASSAPVGGY TYPAPASSGG SSAGYAKIPT YPAPPSAYPN PKPAPTQVST THAGAVQDPT
101: APPSPLVKAG ELVTRLREQG QALIAARRPW AEVFRAPAFS KPPSLGEALA RMRRNTAYFR ANYALAVLAV VAASLLWHPG TLFVLLFLCA AWFFLYFARP
201: AQGGQPLRVL GMEFDDGTVL AALCGVTVIA MLFTSVGWNV VGSVMIGGAL VSAHAALRTT DDLFLTEQEA AGDGLVAAGM SAAGPILPTY VRIG
101: APPSPLVKAG ELVTRLREQG QALIAARRPW AEVFRAPAFS KPPSLGEALA RMRRNTAYFR ANYALAVLAV VAASLLWHPG TLFVLLFLCA AWFFLYFARP
201: AQGGQPLRVL GMEFDDGTVL AALCGVTVIA MLFTSVGWNV VGSVMIGGAL VSAHAALRTT DDLFLTEQEA AGDGLVAAGM SAAGPILPTY VRIG
001: MASPLLPTST TPDQLPGGDP QLLSSLRVLL SRVLATVRHA SADARPWAEL VDRSAFSRPP SLSEATSRVR KNFSYFRANY ITLVAILLAA SLLTHPFALF
101: LLASLAASWL FLYFFRPADQ PLVIGGRTFS DLETLGILCL STVVVMFMTS VGSLLMSTLA VGIMGVAIHG AFRAPEDLFL EEQEAIGSGL FAFFNNNASN
201: AAAAAIATSA MSRVRV
101: LLASLAASWL FLYFFRPADQ PLVIGGRTFS DLETLGILCL STVVVMFMTS VGSLLMSTLA VGIMGVAIHG AFRAPEDLFL EEQEAIGSGL FAFFNNNASN
201: AAAAAIATSA MSRVRV
Arabidopsis Description
PRA1B6PRA1 family protein B6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYQ4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.