Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d037747_P001 | Maize | plastid | 90.82 | 94.68 |
Os05t0200280-01 | Rice | plasma membrane | 75.0 | 76.17 |
TraesCS1D01G130300.1 | Wheat | plastid | 73.98 | 75.92 |
TraesCS1A01G124100.1 | Wheat | plastid | 72.96 | 74.87 |
TraesCS1B01G143000.1 | Wheat | plastid | 72.96 | 74.48 |
HORVU1Hr1G028520.1 | Barley | plastid | 73.47 | 66.67 |
EES00126 | Sorghum | plastid | 61.73 | 63.02 |
GSMUA_Achr7P09070_001 | Banana | plastid | 56.63 | 59.04 |
KRH23330 | Soybean | plastid | 45.41 | 48.37 |
KRH10001 | Soybean | mitochondrion | 44.9 | 47.83 |
PGSC0003DMT400006409 | Potato | plasma membrane | 43.88 | 47.25 |
Solyc03g121460.1.1 | Tomato | plastid | 42.86 | 46.15 |
VIT_09s0002g02400.t01 | Wine grape | plastid | 45.41 | 46.11 |
KRH47141 | Soybean | plasma membrane | 41.84 | 46.07 |
KRH44167 | Soybean | plasma membrane | 41.33 | 46.02 |
CDY26125 | Canola | cytosol, plasma membrane, plastid | 42.86 | 44.44 |
Bra014355.1-P | Field mustard | cytosol, plasma membrane, plastid | 42.35 | 43.92 |
CDY08228 | Canola | plasma membrane | 42.35 | 43.92 |
AT1G55190.1 | Thale cress | plasma membrane | 41.84 | 43.39 |
CDY33064 | Canola | cytosol, plasma membrane, plastid | 40.82 | 42.78 |
VIT_11s0016g02330.t01 | Wine grape | plastid | 40.82 | 42.33 |
CDY24050 | Canola | cytosol, plasma membrane, plastid | 39.8 | 41.71 |
AT3G13720.1 | Thale cress | cytosol, plasma membrane, plastid | 39.29 | 40.96 |
CDY23634 | Canola | plasma membrane | 37.76 | 40.88 |
Bra037983.1-P | Field mustard | extracellular, plasma membrane | 29.08 | 40.71 |
CDX97509 | Canola | plasma membrane | 37.24 | 40.33 |
AT3G13710.1 | Thale cress | plasma membrane | 38.27 | 39.89 |
Bra027406.1-P | Field mustard | plasma membrane | 35.71 | 38.67 |
CDY51735 | Canola | plasma membrane | 35.71 | 38.46 |
Bra021504.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 35.2 | 37.91 |
AT1G17700.1 | Thale cress | plasma membrane | 34.69 | 37.78 |
CDX81845 | Canola | plasma membrane | 34.69 | 37.57 |
CDY26225 | Canola | plasma membrane | 35.2 | 37.5 |
CDY37483 | Canola | plasma membrane | 34.69 | 37.36 |
Bra031001.1-P | Field mustard | plasma membrane | 34.18 | 37.02 |
Bra025954.1-P | Field mustard | plasma membrane | 34.69 | 36.96 |
EER90731 | Sorghum | plastid | 41.84 | 36.61 |
KRH49060 | Soybean | plasma membrane | 34.69 | 34.34 |
CDY59501 | Canola | plasma membrane | 32.14 | 34.24 |
CDY06788 | Canola | plastid | 33.67 | 34.02 |
KRH74153 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 34.69 | 34.0 |
AT4G29658.2 | Thale cress | plastid | 32.14 | 33.16 |
CDY43514 | Canola | mitochondrion | 29.59 | 33.14 |
Bra011125.1-P | Field mustard | mitochondrion | 29.59 | 33.14 |
KXG22202 | Sorghum | plastid | 33.67 | 30.41 |
OQU82692 | Sorghum | plastid | 32.65 | 28.57 |
EES15518 | Sorghum | plastid | 32.14 | 27.04 |
EES03822 | Sorghum | plastid | 29.59 | 26.01 |
EER93477 | Sorghum | plastid | 35.2 | 23.47 |
KXG38626 | Sorghum | golgi, plasma membrane, plastid | 21.94 | 23.24 |
OQU79263 | Sorghum | plastid | 19.39 | 23.03 |
CDY37482 | Canola | plastid | 22.96 | 21.53 |
Bra021503.1-P | Field mustard | plastid | 22.45 | 21.15 |
CDY51734 | Canola | plastid | 22.45 | 21.05 |
Bra021502.1-P | Field mustard | plastid | 21.43 | 19.63 |
CDY51733 | Canola | plastid | 21.43 | 19.63 |
CDY55133 | Canola | plasma membrane | 20.92 | 19.25 |
Protein Annotations
EnsemblPlants:OQU77594 | EnsemblPlantsGene:SORBI_3009G074100 | EntrezGene:8065918 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF10 | PFAM:PF03208 | ProteinID:EES19198.1 | ProteinID:OQU77594 |
ProteinID:OQU77594.1 | ProteinID:OQU77595.1 | ProteinID:OQU77596.1 | RefSeq:XP_002440768.1 | SEG:seg | TMHMM:TMhelix |
UniParc:UPI0001A88740 | UniProt:C5YUK5 | MapMan:22.8.4.3.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:9266622..9270630
Molecular Weight (calculated)
20923.6 Da
IEP (calculated)
10.253
GRAVY (calculated)
0.574
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKYGTIPTT SSTPPPGASS SSSSPLDFIS RAKARGASAL ATRRPWRELA DPRALSVPRG FSAAYRRARA NLAHFAANYA LVVLLVVFVS LLWRPVSMLV
101: FLACFAAWLV LYFLRDRDAD GALVVCGRGV GDGVVIAVLS AVTLVLLLLT GATGFILTSL LVGLLLVLLH ALLHRPADSI DDEAGRWYTP VPPSSY
101: FLACFAAWLV LYFLRDRDAD GALVVCGRGV GDGVVIAVLS AVTLVLLLLT GATGFILTSL LVGLLLVLLH ALLHRPADSI DDEAGRWYTP VPPSSY
001: MTNYGAIPTS SHPSPAIDLE YISRAKHRIK SGLATRRPWK SMFDFESMTL PHGFFDAISR IKTNLGYFRA NYAIGVLFIL FLSLLYHPTS LIVLSILVVF
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
Arabidopsis Description
PRA1F2PRA1 family protein F2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C889]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.