Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014355.1-P | Field mustard | cytosol, plasma membrane, plastid | 99.47 | 99.47 |
| CDY26125 | Canola | cytosol, plasma membrane, plastid | 93.12 | 93.12 |
| AT1G55190.1 | Thale cress | plasma membrane | 80.95 | 80.95 |
| CDY33064 | Canola | cytosol, plasma membrane, plastid | 79.89 | 80.75 |
| CDY24050 | Canola | cytosol, plasma membrane, plastid | 78.31 | 79.14 |
| CDY23634 | Canola | plasma membrane | 59.79 | 62.43 |
| CDX97509 | Canola | plasma membrane | 58.2 | 60.77 |
| CDY37483 | Canola | plasma membrane | 54.5 | 56.59 |
| CDY51735 | Canola | plasma membrane | 53.97 | 56.04 |
| Solyc03g121460.1.1 | Tomato | plastid | 53.97 | 56.04 |
| PGSC0003DMT400006409 | Potato | plasma membrane | 53.44 | 55.49 |
| VIT_09s0002g02400.t01 | Wine grape | plastid | 53.97 | 52.85 |
| KRH47141 | Soybean | plasma membrane | 49.74 | 52.81 |
| KRH44167 | Soybean | plasma membrane | 48.15 | 51.7 |
| KRH10001 | Soybean | mitochondrion | 50.26 | 51.63 |
| KRH23330 | Soybean | plastid | 48.68 | 50.0 |
| GSMUA_Achr7P09070_001 | Banana | plastid | 47.09 | 47.34 |
| TraesCS1D01G130300.1 | Wheat | plastid | 46.56 | 46.07 |
| TraesCS1A01G124100.1 | Wheat | plastid | 46.03 | 45.55 |
| TraesCS1B01G143000.1 | Wheat | plastid | 46.03 | 45.31 |
| CDY26225 | Canola | plasma membrane | 43.92 | 45.11 |
| CDX81845 | Canola | plasma membrane | 42.86 | 44.75 |
| CDY59501 | Canola | plasma membrane | 43.39 | 44.57 |
| Os05t0200280-01 | Rice | plasma membrane | 45.5 | 44.56 |
| EES00126 | Sorghum | plastid | 43.92 | 43.23 |
| Zm00001d037747_P001 | Maize | plastid | 42.86 | 43.09 |
| TraesCS3D01G106500.1 | Wheat | plastid | 42.86 | 42.63 |
| TraesCS3B01G122600.1 | Wheat | plastid | 42.86 | 42.63 |
| Zm00001d039455_P002 | Maize | extracellular, mitochondrion | 43.39 | 42.49 |
| OQU77594 | Sorghum | plastid | 43.92 | 42.35 |
| TraesCS3A01G104300.1 | Wheat | plastid | 42.33 | 41.88 |
| Os01t0196500-01 | Rice | plastid | 42.86 | 40.3 |
| HORVU1Hr1G028520.1 | Barley | plastid | 45.5 | 39.81 |
| CDY37482 | Canola | plastid | 39.15 | 35.41 |
| CDY55133 | Canola | plasma membrane | 39.68 | 35.21 |
| CDY51733 | Canola | plastid | 39.68 | 35.05 |
| CDX93539 | Canola | plastid | 38.1 | 34.62 |
| CDX95035 | Canola | plastid | 37.04 | 33.65 |
| CDY51734 | Canola | plastid | 37.04 | 33.49 |
| CDY43514 | Canola | mitochondrion | 30.69 | 33.14 |
| CDY06788 | Canola | plastid | 33.86 | 32.99 |
| CDY41253 | Canola | plastid | 14.81 | 32.56 |
| CDY27245 | Canola | plastid | 34.92 | 32.51 |
| CDX72173 | Canola | plastid | 34.92 | 32.51 |
| CDX74794 | Canola | plastid | 35.98 | 31.92 |
| CDY51077 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 31.22 | 31.89 |
| HORVU3Hr1G018940.2 | Barley | plastid | 42.86 | 31.76 |
| CDY50022 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 30.69 | 31.18 |
| CDY18870 | Canola | plastid | 34.39 | 31.1 |
| CDY31997 | Canola | plastid | 33.86 | 30.48 |
| CDY25186 | Canola | plastid | 13.76 | 30.23 |
| CDY05662 | Canola | plastid | 11.64 | 30.14 |
| CDX67633 | Canola | plastid | 33.33 | 29.86 |
| CDY15494 | Canola | plasma membrane | 28.04 | 29.78 |
| CDX86646 | Canola | plasma membrane | 28.04 | 29.78 |
| CDY32804 | Canola | plastid | 29.1 | 29.26 |
| CDX70153 | Canola | plastid | 32.28 | 28.37 |
| CDX80758 | Canola | plastid | 31.75 | 28.04 |
| CDY61529 | Canola | plastid | 17.99 | 26.98 |
| CDY17405 | Canola | plastid | 26.98 | 26.56 |
| CDX81033 | Canola | plastid | 30.16 | 26.15 |
| CDY58876 | Canola | plastid | 29.63 | 25.69 |
| CDY07736 | Canola | plastid | 28.04 | 23.87 |
| CDY63156 | Canola | plastid | 27.51 | 23.85 |
| CDY54457 | Canola | endoplasmic reticulum, peroxisome, plasma membrane | 21.16 | 21.98 |
Protein Annotations
| EnsemblPlants:CDY08228 | EnsemblPlantsGene:GSBRNA2T00125548001 | GO:A0A078F8Z2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Prenylated_rab_accept_PRA1 | PANTHER:PTHR19317 | PANTHER:PTHR19317:SF2 | PFAM:PF03208 | ProteinID:CDY08228 | ProteinID:CDY08228.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF09A3 | UniProt:A0A078F8Z2 | MapMan:22.8.4.3.2 | : |
Description
BnaA05g13910DPRA1 family protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8Z2]
Coordinates
chrLK031984:+:215560..216213
Molecular Weight (calculated)
20962.7 Da
IEP (calculated)
7.255
GRAVY (calculated)
0.479
Length
189 amino acids
Sequence
(BLAST)
(BLAST)
001: MTNYGAIPTS SHPSPPVDLE YISHVKHRLK AGLATRRPWR SMFDLESMTV PQGFLDAISR MKTNLVYFRA NYAIAVLFML FVSLLYHPTS LLVLAILVVF
101: WIFLYFLRDE PLVLFGHQVD DRTVMISLSA LTIGMLLFTH ATGNILGSLL TAVVLVLIHA GVRRSDNLYS DEEAAAAAET SGLASYPSS
101: WIFLYFLRDE PLVLFGHQVD DRTVMISLSA LTIGMLLFTH ATGNILGSLL TAVVLVLIHA GVRRSDNLYS DEEAAAAAET SGLASYPSS
001: MTNYGAIPTS SHPSPAIDLE YISRAKHRIK SGLATRRPWK SMFDFESMTL PHGFFDAISR IKTNLGYFRA NYAIGVLFIL FLSLLYHPTS LIVLSILVVF
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
101: WIFLYFLRDE PLVVFGYQID DRTVLIGLSV LTVVMLLLTH ATSNILGSLL TAAVLVLIHA AVRRSDNLFL DEEAAAVTEA SGLMSYPSS
Arabidopsis Description
PRA1F2PRA1 family protein F2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C889]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.