Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G51180.1 | CDX84035 | AT1G14340.1 | 21798944 |
| AT5G51180.1 | CDX96860 | AT1G14340.1 | 21798944 |
| AT5G51180.1 | CDY49093 | AT1G14340.1 | 21798944 |
| AT5G51180.1 | CDY62016 | AT1G14340.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035731.1-P | Field mustard | cytosol | 100.0 | 99.12 |
| CDX71694 | Canola | cytosol | 98.23 | 94.33 |
| AT5G51180.1 | Thale cress | cytoskeleton, cytosol, nucleus | 86.73 | 82.35 |
| PGSC0003DMT400027928 | Potato | nucleus | 70.21 | 66.11 |
| Solyc03g093510.2.1 | Tomato | nucleus | 69.91 | 65.65 |
| GSMUA_Achr5P15490_001 | Banana | cytosol | 61.65 | 64.91 |
| GSMUA_Achr7P06920_001 | Banana | cytosol | 61.65 | 64.71 |
| KRG90131 | Soybean | cytosol | 67.26 | 64.04 |
| VIT_16s0013g01410.t01 | Wine grape | cytosol | 65.49 | 63.79 |
| KRH33381 | Soybean | cytosol | 66.96 | 63.59 |
| GSMUA_Achr4P28970_001 | Banana | cytosol | 66.37 | 63.2 |
| PGSC0003DMT400069125 | Potato | cytosol | 67.55 | 62.91 |
| OQU79861 | Sorghum | cytosol | 65.49 | 62.71 |
| Solyc05g052020.2.1 | Tomato | cytosol | 67.26 | 62.64 |
| GSMUA_Achr2P12000_001 | Banana | cytosol | 63.42 | 62.5 |
| EES05791 | Sorghum | cytosol | 63.42 | 62.32 |
| TraesCS7D01G302900.1 | Wheat | cytoskeleton, cytosol, nucleus | 63.72 | 61.36 |
| TraesCS7A01G306200.1 | Wheat | cytosol | 63.72 | 61.19 |
| TraesCS7B01G206400.1 | Wheat | cytosol | 63.42 | 60.91 |
| Zm00001d017470_P001 | Maize | cytosol | 62.83 | 59.83 |
| Os08t0143700-01 | Rice | cytoskeleton, cytosol, nucleus | 61.36 | 59.43 |
| TraesCS6D01G226000.1 | Wheat | cytosol | 61.36 | 59.09 |
| TraesCS6A01G243800.1 | Wheat | cytosol | 60.18 | 58.29 |
| HORVU6Hr1G062800.5 | Barley | cytosol | 61.36 | 58.26 |
| TraesCS6B01G280500.1 | Wheat | cytoskeleton, cytosol, nucleus | 60.77 | 58.19 |
| Zm00001d024645_P001 | Maize | cytosol | 64.01 | 56.36 |
| HORVU7Hr1G072940.6 | Barley | plastid | 59.59 | 50.63 |
| Os02t0655600-01 | Rice | cytosol | 18.88 | 46.38 |
| CDY31052 | Canola | nucleus | 49.56 | 44.92 |
| CDY20663 | Canola | nucleus | 49.85 | 44.24 |
| CDY68099 | Canola | plastid | 51.33 | 42.96 |
| CDX94416 | Canola | plastid | 51.03 | 42.3 |
| CDY15650 | Canola | cytosol | 31.27 | 40.77 |
| CDX81158 | Canola | cytosol | 19.17 | 34.57 |
| CDX90168 | Canola | plastid | 41.0 | 31.24 |
| CDY43318 | Canola | plastid | 41.0 | 31.17 |
| CDX98042 | Canola | cytosol | 12.68 | 14.53 |
Protein Annotations
| EnsemblPlants:CDY05841 | EnsemblPlantsGene:GSBRNA2T00120973001 | Gene3D:3.40.50.1820 | InterPro:AB_hydrolase | InterPro:DUF676_lipase-like | InterPro:IPR029058 |
| PANTHER:PTHR12482 | PANTHER:PTHR12482:SF14 | PFAM:PF05057 | ProteinID:CDY05841 | ProteinID:CDY05841.1 | SUPFAM:SSF53474 |
| UniParc:UPI0004EF1E66 | MapMan:35.2 | : | : | : | : |
Description
BnaA10g05790D
Coordinates
chrLK031965:+:651142..653610
Molecular Weight (calculated)
37911.2 Da
IEP (calculated)
6.196
GRAVY (calculated)
-0.239
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEGVCSAES VVDGSLDVWS CKNSAADHLV VMVHGILGST DDWKFGAEQF VKRLPHKLFV HCSEKNASAL TLDGVDVMGE RLASEVLEIV ETRPNIRKIS
101: FVAHSLGGLA ARYAIGKLYK PPNLQGPSQG TICGLEAVNF ITVATPHLGS MGNRQVPFLF GVSSFEKVAG LVIHWIFKRT GRHLFLKDEE EGKPPLLRRM
201: VEDTGDCHFM SALRAFKRRV VYSNVGHDHI VGWRTASIRR DSELPKWEDS LDEKYPHIVY EELCKSCDGE DVPEGETHSN DIEEEMIKGL STVSWEKVDV
301: SFHSSRQRFA AHSVIQVKSE TMHIEGADVI EHIIDHFHP
101: FVAHSLGGLA ARYAIGKLYK PPNLQGPSQG TICGLEAVNF ITVATPHLGS MGNRQVPFLF GVSSFEKVAG LVIHWIFKRT GRHLFLKDEE EGKPPLLRRM
201: VEDTGDCHFM SALRAFKRRV VYSNVGHDHI VGWRTASIRR DSELPKWEDS LDEKYPHIVY EELCKSCDGE DVPEGETHSN DIEEEMIKGL STVSWEKVDV
301: SFHSSRQRFA AHSVIQVKSE TMHIEGADVI EHIIDHFHP
001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA
Arabidopsis Description
AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.