Factsheet for TraesCS7B01G206400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G521600.1
TraesCS2B01G551100.1
TraesCS2D01G523400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51180.1	TraesCS2A01G521600.1	AT1G14340.1	21798944
AT5G51180.1	TraesCS2B01G551100.1	AT1G14340.1	21798944
AT5G51180.1	TraesCS2D01G523400.1	AT1G14340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G306200.1	Wheat	cytosol	99.72	99.72
TraesCS7D01G302900.1	Wheat	cytoskeleton, cytosol, nucleus	98.87	99.15
Os08t0143700-01	Rice	cytoskeleton, cytosol, nucleus	83.0	83.71
OQU79861	Sorghum	cytosol	82.15	81.92
HORVU7Hr1G072940.6	Barley	plastid	90.08	79.7
Zm00001d024645_P001	Maize	cytosol	78.75	72.21
CDY05841	Canola	cytosol	60.91	63.42
Bra035731.1-P	Field mustard	cytosol	61.19	63.16
AT5G51180.1	Thale cress	cytoskeleton, cytosol, nucleus	63.74	63.03
KRG90131	Soybean	cytosol	62.04	61.52
CDX71694	Canola	cytosol	61.47	61.47
KRH33381	Soybean	cytosol	61.47	60.78
Solyc05g052020.2.1	Tomato	cytosol	61.19	59.34
PGSC0003DMT400027928	Potato	nucleus	60.34	59.17
PGSC0003DMT400069125	Potato	cytosol	60.91	59.07
Solyc03g093510.2.1	Tomato	nucleus	60.34	59.0
VIT_16s0013g01410.t01	Wine grape	cytosol	58.07	58.91
TraesCS6B01G280500.1	Wheat	cytoskeleton, cytosol, nucleus	58.36	58.19
TraesCS4B01G057600.2	Wheat	cytosol, mitochondrion	47.31	43.6
TraesCS7B01G177600.2	Wheat	plastid	48.73	39.81
TraesCS6B01G379700.1	Wheat	plastid	49.58	38.38
TraesCS7B01G008200.1	Wheat	plastid	43.34	35.5

Protein Annotations

EnsemblPlants:TraesCS7B01G206400.1	EnsemblPlantsGene:TraesCS7B01G206400	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058
PANTHER:PTHR12482	PANTHER:PTHR12482:SF14	PFAM:PF05057	SEG:seg	SUPFAM:SSF53474	MapMan:35.2

Description

No Description!

Coordinates

chr7B:+:377593505..377603917

Molecular Weight (calculated)

39583.0 Da

IEP (calculated)

5.266

GRAVY (calculated)

-0.187

Length

353 amino acids

Sequence
(BLAST)

001: MMAGASGSVE EEGGLRAEES PSGGVDVWSD AVSSHAPEHL LVMVHGILGS TNDWQYAANE FVKQLPDDVI VHCSEKNMNT LTLDGVDVMG ERLADEVLDV
101: ISRKPELTKI SFLAHSVGGL VARYAIAKLY RHPNSTFDSK AEGTVCGLEA VNFITVATPH LGSRGNKQVP LLFGFITIEK VASRVIHWIF RRTGRHLFLT
201: DSAEGEPPLL QRMVEDYGDL YFISALRAFK RRVAYANADC DHIVGWRTSS IRRNTELPKW EESVCEKYPH IVHEEYSEEI SDEKCQDLAA DCDFDLLEEK
301: MVTGLRRVSW EKVDVSFHTS MRSFAAHSII QVKYAFMNEG ADVIQHIIDH FQL

Best Arabidopsis Sequence Match ( AT5G51180.1 )
(BLAST)

001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA

Arabidopsis Description

AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.