Factsheet for HORVU7Hr1G072940.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G115210.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G51180.1	HORVU2Hr1G115210.1	AT1G14340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G306200.1	Wheat	cytosol	79.95	90.37
TraesCS7B01G206400.1	Wheat	cytosol	79.7	90.08
TraesCS7D01G302900.1	Wheat	cytoskeleton, cytosol, nucleus	79.45	90.06
Os08t0143700-01	Rice	cytoskeleton, cytosol, nucleus	66.92	76.29
OQU79861	Sorghum	cytosol	66.42	74.86
Zm00001d024645_P001	Maize	cytosol	63.41	65.71
CDY05841	Canola	cytosol	50.63	59.59
Bra035731.1-P	Field mustard	cytosol	50.88	59.36
AT5G51180.1	Thale cress	cytoskeleton, cytosol, nucleus	52.88	59.1
VIT_16s0013g01410.t01	Wine grape	cytosol	50.88	58.33
CDX71694	Canola	cytosol	51.13	57.79
KRG90131	Soybean	cytosol	51.38	57.58
KRH33381	Soybean	cytosol	50.38	56.3
Solyc05g052020.2.1	Tomato	cytosol	50.63	55.49
PGSC0003DMT400027928	Potato	nucleus	49.87	55.28
PGSC0003DMT400069125	Potato	cytosol	50.38	55.22
Solyc03g093510.2.1	Tomato	nucleus	49.87	55.12
HORVU6Hr1G062800.5	Barley	cytosol	47.87	53.5
HORVU7Hr1G060790.8	Barley	plastid	40.1	37.04
HORVU4Hr1G009670.6	Barley	cytosol	37.84	36.65
HORVU7Hr1G023560.21	Barley	nucleus	37.34	28.44

Protein Annotations

EnsemblPlants:HORVU7Hr1G072940.6	EnsemblPlantsGene:HORVU7Hr1G072940	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	InterPro:DUF676_lipase-like	InterPro:IPR029058
PANTHER:PTHR12482	PANTHER:PTHR12482:SF14	PFAM:PF05057	SUPFAM:SSF53474	UniParc:UPI000B47AA9A	UniProt:A0A287WV52
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:410009675..410016861

Molecular Weight (calculated)

44729.2 Da

IEP (calculated)

6.378

GRAVY (calculated)

-0.200

Length

399 amino acids

Sequence
(BLAST)

001: IGTSVKWAEL TLTGIHNLHA FPPLSLPRSL AGPHFPSTRY AVRRNPHTFP FRRPIARRLL AHPAEETAIM AAASGSVEEE GGLRAEESPS GGVDVWSDAV
101: SSHAPEHLLV MVHGILGSTN DWQYAANEFV KQLPDDVIVH CSEKNMNTLT LDGVDVMGER LADEVLDVIS RKPELSKISF LAHSVGGLVA RYAIAKLYRH
201: PNSTFDSKAE GTICGLEAVN FITVATPHLG SRGNKQVPLL FGFITIEKVA SRVIHWIFRR TGRHLFLTDS AEGEQPLLQC MVEDYGDLYF ISALRAFKRR
301: VAYANADCDY IVGWRTSSIR RNTELPKWEE SLCEKYPHIV HEEYSEEIDH EKCQDLVPDC DFDLLEEKMV TGLRRVSWEK VDVSFHASMR SFAAHSIIQ

Best Arabidopsis Sequence Match ( AT5G51180.1 )
(BLAST)

001: MEKHEEENGL CKAESVDGSL DVWSCQNSDS SSADHLVVMV HGILGSTDDW KFGAEQFVKK MPDKVFVHCS EKNVSALTLD GVDVMGERLA AEVLDIIQRK
101: PNICKISFVA HSLGGLAARY AIGKLYKPAN QEDVKDSVAD SSQETPKGTI CGLEAMNFIT VATPHLGSMG NKQVPFLFGF SSIEKVAGLI IHWIFKRTGR
201: HLFLKDEEEG KPPLLRRMVE DTDDCHFISA LRAFKRRVAY SNVGHDHVVG WKTASIRRDS ELPKWEDSLN EKYPHIVYEE LCKACDMEDI PEGENHSDDI
301: EEEMIKGLSS VSWEKVDVSF HSSRQRFAAH SVIQVKNEDM HIEGADVIEH IIDHFHA

Arabidopsis Description

AT5G51180 protein [Source:UniProtKB/TrEMBL;Acc:Q949V0]
SUBAcon: [cytoskeleton,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.